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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF06918.1
DDBJ      :             porin, gram-negative type
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  48/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
f.4.3
:111 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->100 2fgrA PDBj 2e-08 41.8 %
:RPS:PDB   22->92 1e54A PDBj 2e-11 37.1 %
:RPS:SCOP  22->93 1e54A  f.4.3.1 * 4e-17 36.6 %
:HMM:SCOP  14->97 1hxxA_ f.4.3.1 * 3.5e-23 47.5 %
:RPS:PFM   52->93 PF00267 * Porin_1 2e-07 59.5 %
:HMM:PFM   49->89 PF00267 * Porin_1 5.9e-08 29.3 41/336  
:BLT:SWISS 21->109 OMP_BORPE 6e-17 51.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF06918.1 GT:GENE ABF06918.1 GT:PRODUCT porin, gram-negative type GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(35163..35498) GB:FROM 35163 GB:TO 35498 GB:DIRECTION - GB:PRODUCT porin, gram-negative type GB:PROTEIN_ID ABF06918.1 GB:DB_XREF GI:93352829 LENGTH 111 SQ:AASEQ MKKSLLTLALGSLFAGGAYAQTSVTLYGIADASIHYTTNADANNHGQLAMDNGAITQSRWGLKGAEALGNNLKAIFQLENGFNVPNGTMSSSGQIFNLTLPLFHESHNRGN GT:EXON 1|1-111:0| BL:SWS:NREP 1 BL:SWS:REP 21->109|OMP_BORPE|6e-17|51.7|89/385| BL:PDB:NREP 1 BL:PDB:REP 21->100|2fgrA|2e-08|41.8|79/332| RP:PDB:NREP 1 RP:PDB:REP 22->92|1e54A|2e-11|37.1|70/331| RP:PFM:NREP 1 RP:PFM:REP 52->93|PF00267|2e-07|59.5|42/306|Porin_1| HM:PFM:NREP 1 HM:PFM:REP 49->89|PF00267|5.9e-08|29.3|41/336|Porin_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00267|IPR001702| GO:PFM GO:0006810|"GO:transport"|PF00267|IPR001702| GO:PFM GO:0016020|"GO:membrane"|PF00267|IPR001702| RP:SCP:NREP 1 RP:SCP:REP 22->93|1e54A|4e-17|36.6|71/332|f.4.3.1| HM:SCP:REP 14->97|1hxxA_|3.5e-23|47.5|80/0|f.4.3.1|1/1|Porins| OP:NHOMO 812 OP:NHOMOORG 49 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------24426QXaUVTLJGHDPPgZPNLJ9MpP*AKHK--CBB---1157321112-----------------32--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 87 STR:RPRED 78.4 SQ:SECSTR #############EEEEEEEEcEEEEEEEEEEEEEEEccGcTTcccEEEEEEccccccEEEEEEEEEEETTEEEEEEEEEEccTTTTcTTcccccEEEEE########### DISOP:02AL 1-1,110-112| PSIPRED ccHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEEEEcccccccEEEEEccccccccEEEEEEcccccccEEEEEEEEccEEccccccccccEEccccccccHHcccccc //