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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF06988.1
DDBJ      :             transcriptional regulator, MerR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  131/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.6.1
:144 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->113 1q06B PDBj 8e-08 29.9 %
:RPS:PDB   10->126 3d71A PDBj 1e-13 16.7 %
:RPS:SCOP  10->116 1jbgA  a.6.1.3 * 4e-12 19.2 %
:HMM:SCOP  10->126 1exjA1 a.6.1.3 * 1.4e-23 34.8 %
:HMM:PFM   54->119 PF09278 * MerR-DNA-bind 2.3e-16 41.3 63/65  
:HMM:PFM   11->47 PF00376 * MerR 1.2e-13 37.8 37/38  
:BLT:SWISS 12->125 CUER_SALTI 1e-06 27.5 %
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF06988.1 GT:GENE ABF06988.1 GT:PRODUCT transcriptional regulator, MerR family GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 108861..109295 GB:FROM 108861 GB:TO 109295 GB:DIRECTION + GB:PRODUCT transcriptional regulator, MerR family GB:PROTEIN_ID ABF06988.1 GB:DB_XREF GI:93352899 InterPro:IPR000551 LENGTH 144 SQ:AASEQ MSAQPSTVTYTITDLAREFDITPRAIRFYEDQGLLAPDREGPSGRRRVYNSRERTRLKLTLRGKRLGLTLNEIREILDLYESPRDTAPQLERFLHLLAGHRGTLERQLEDLQAQLAEIDQHERQCQALLAAQHAKNAGNKTPTA GT:EXON 1|1-144:0| BL:SWS:NREP 1 BL:SWS:REP 12->125|CUER_SALTI|1e-06|27.5|109/138| COIL:NAA 42 COIL:NSEG 1 COIL:REGION 90->131| SEG 54->70|rtrlkltlrgkrlgltl| BL:PDB:NREP 1 BL:PDB:REP 12->113|1q06B|8e-08|29.9|97/126| RP:PDB:NREP 1 RP:PDB:REP 10->126|3d71A|1e-13|16.7|108/277| HM:PFM:NREP 2 HM:PFM:REP 54->119|PF09278|2.3e-16|41.3|63/65|MerR-DNA-bind| HM:PFM:REP 11->47|PF00376|1.2e-13|37.8|37/38|MerR| RP:SCP:NREP 1 RP:SCP:REP 10->116|1jbgA|4e-12|19.2|104/106|a.6.1.3| HM:SCP:REP 10->126|1exjA1|1.4e-23|34.8|115/118|a.6.1.3|1/1|Putative DNA-binding domain| OP:NHOMO 142 OP:NHOMOORG 131 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------1-1----------------------------------------------------------------------------------------------------------------------------------------------------------1112------------------11111111111---------212-11111111111121111---1111-----------1-----12------------------------------1121-11111-------------11--------11111--1111-11111111--------21----------111-----------------------------------------------------------22-11-1111-1111111111111111111---------------------------------------------------------------------------------------------------1----------11---------------------------1-11111111111111111-------------2-----12-11------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 118 STR:RPRED 81.9 SQ:SECSTR ########cEEHHHHHHHHTccHHHHHHHHHTTcccccEEcTTTccEEEcTTGGGHHHHHHHHHHTTccHHHHHHHTTccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH################## DISOP:02AL 1-6,129-145| PSIPRED cccccccccEEHHHHHHHHcccHHHHHHHHHcccccccccccccccEEccHHHHHHHHEEEcHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc //