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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF06989.1
DDBJ      :             isovaleryl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  581/915 : Eukaryota  165/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:393 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->386 1ivhA PDBj e-137 65.0 %
:RPS:PDB   9->391 3d9dB PDBj 5e-98 19.7 %
:RPS:SCOP  7->235 1siqA2  e.6.1.1 * 2e-76 37.1 %
:RPS:SCOP  239->389 1siqA1  a.29.3.1 * 1e-31 26.7 %
:HMM:SCOP  8->248 1w07A3 e.6.1.2 * 3.1e-88 47.7 %
:HMM:SCOP  233->391 2c12A1 a.29.3.1 * 5.3e-42 38.6 %
:RPS:PFM   13->124 PF02771 * Acyl-CoA_dh_N 2e-26 46.4 %
:RPS:PFM   128->179 PF02770 * Acyl-CoA_dh_M 3e-11 51.9 %
:RPS:PFM   237->388 PF00441 * Acyl-CoA_dh_1 1e-24 40.4 %
:HMM:PFM   235->388 PF00441 * Acyl-CoA_dh_1 1.1e-45 38.3 149/150  
:HMM:PFM   13->124 PF02771 * Acyl-CoA_dh_N 4.3e-41 50.0 112/113  
:HMM:PFM   128->178 PF02770 * Acyl-CoA_dh_M 7.5e-22 52.9 51/52  
:BLT:SWISS 11->386 IVD_MOUSE e-137 65.5 %
:PROS 130->142|PS00072|ACYL_COA_DH_1
:PROS 347->366|PS00073|ACYL_COA_DH_2

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF06989.1 GT:GENE ABF06989.1 GT:PRODUCT isovaleryl-CoA dehydrogenase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 109418..110599 GB:FROM 109418 GB:TO 110599 GB:DIRECTION + GB:PRODUCT isovaleryl-CoA dehydrogenase GB:PROTEIN_ID ABF06989.1 GB:DB_XREF GI:93352900 InterPro:IPR006089 InterPro:IPR006090 InterPro:IPR006091 InterPro:IPR006092 InterPro:IPR013107 LENGTH 393 SQ:AASEQ MTELPGLKFDLGEDIEMLRESVRNWAQAELAPRAAEIDRTDQFPMDAWRKMGDLGVLGITVAEEYGGANMGYLAHMIAMEEISRASASVGLSYGAHSNLCVNQIHRNGTAAQKAKYLPKLVSGEWIGALAMSEPNAGSDVVSMKLRADFKGDRYVLNGTKMWITNGPDCDVLVVYAKTEPDLGARGMTAFIVEKGMKGFSVAQKLDKLGMRGSHTGELVFQDVEVPVENILGAENGGAKVLMSGLDYERAVLSGGPVGIMQACMDVITPYIHDRKQFGQSIGEFQLIQGKVADMYTTLQAARSYLYTVGKNLDSLGTDHVRQVRKDCAAVILYTAEKATWMAGESVQILGGNGYINEYPVGRLWRDAKLYEIGAGTSEIRRMLIGRELFSETM GT:EXON 1|1-393:0| BL:SWS:NREP 1 BL:SWS:REP 11->386|IVD_MOUSE|e-137|65.5|371/424| PROS 130->142|PS00072|ACYL_COA_DH_1|PDOC00070| PROS 347->366|PS00073|ACYL_COA_DH_2|PDOC00070| BL:PDB:NREP 1 BL:PDB:REP 11->386|1ivhA|e-137|65.0|369/387| RP:PDB:NREP 1 RP:PDB:REP 9->391|3d9dB|5e-98|19.7|381/431| RP:PFM:NREP 3 RP:PFM:REP 13->124|PF02771|2e-26|46.4|112/113|Acyl-CoA_dh_N| RP:PFM:REP 128->179|PF02770|3e-11|51.9|52/53|Acyl-CoA_dh_M| RP:PFM:REP 237->388|PF00441|1e-24|40.4|146/150|Acyl-CoA_dh_1| HM:PFM:NREP 3 HM:PFM:REP 235->388|PF00441|1.1e-45|38.3|149/150|Acyl-CoA_dh_1| HM:PFM:REP 13->124|PF02771|4.3e-41|50.0|112/113|Acyl-CoA_dh_N| HM:PFM:REP 128->178|PF02770|7.5e-22|52.9|51/52|Acyl-CoA_dh_M| GO:PFM:NREP 6 GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02771|IPR006092| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02771|IPR006092| GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02770|IPR006091| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02770|IPR006091| GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 7->235|1siqA2|2e-76|37.1|224/236|e.6.1.1| RP:SCP:REP 239->389|1siqA1|1e-31|26.7|146/154|a.29.3.1| HM:SCP:REP 8->248|1w07A3|3.1e-88|47.7|241/0|e.6.1.2|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 233->391|2c12A1|5.3e-42|38.6|158/0|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 7490 OP:NHOMOORG 776 OP:PATTERN 55----6888A88977-243532DA6661-7C-----------------------------5661--- 4556Y3-5111846Y*oPP-Pl33pvPPPPPYrq*qdn**4g8n1133-11-667668--KHY1FGTOINE--------384B-----11111122---41545664565--------------------------67699---C322-2223---------------15-------------88967--1F746666646666666663566656667BBAB11------53-22222212222222211-2--1------------------------------------------------------------------111315444444444423222221-6-316-13-B91598-17---11-3-71-SLLV-----61ZOR665THURLAA9A9AA7978-44C44H4CACa-7779857667799HAUBADE7777D9J11111111B----9B6-----------------------------1OMaN18WLDSFEGKSECAEEBCCPHJJJJBJUDaawrm35HIDD6FIHPGLMTe349-1-166--11111212I884jGL-----------765-B-5--7787EC66----1-------1--------1-----54-9G497GB1676666AE6666B6E8688---221-------42621213445355444-443434443444444344322111112544245544353533521233233--222232212232---6222227777-ME43-----------1---KKKGKDI8AAB1QQQSAPFIMHEHGGA8B1111111111111422222462446655555555------12BB98BB----------1-------------------------1--11-1------ ----68A-942-AAAECCBC9AAB89CCC9A9A888AA9A8AABCC987889CF8A7767774--------------------------8B7C8876556999DCD-CA6JEVBBFDA999AD9JC7J9U*E-FBQ8B96D7AGB49B79D83GACBBOAGI8KCF9A8CEFJEH2344j43355866HB4744F9A9A ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 393 STR:RPRED 100.0 SQ:SECSTR cccTTcccccccHHHHHHHHHHHHHHHHTGGGHHHHHcHHHHHHHTHHHHHHHTTTTGGGccGGGTcccccHHHHHHHHHHHHHHccTTHHHHHHHHcHHHHHHHHcccHHHHHHHHGGGGcccccEEEEcccTTccTTTTccccEEEEETTEEEEEEEEEccTTTccccEEEEEEEEcccTTGGGEEEEEEcHHHHHTccGGGEcccccTTccccEEEEEEEEEEGGGccccTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccTTcccGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcGGGGcTTccHHHHHHHHTTTTTcccTTTTHHHHHHHHHHcTHH DISOP:02AL 1-1,393-394| PSIPRED ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccEEEEEEcccccccccHHHcEEEEEEEccEEEEEEEEEEEcccccccEEEEEEEEccccccccEEEEEEEcccccEEEEccccccccccccEEEEEEccEEccHHHHccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHc //