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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF06993.1
DDBJ      :             short-chain dehydrogenase/reductase SDR
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  403/915 : Eukaryota  106/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:226 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   50->226 1snyA PDBj 3e-19 35.6 %
:RPS:PDB   3->185 1a27A PDBj 1e-18 23.7 %
:RPS:SCOP  3->185 1pwxA  c.2.1.2 * 8e-19 14.8 %
:HMM:SCOP  1->226 1snyA_ c.2.1.2 * 1.8e-83 41.3 %
:RPS:PFM   4->168 PF00106 * adh_short 6e-12 36.9 %
:HMM:PFM   3->159 PF00106 * adh_short 5.1e-19 29.7 145/167  
:BLT:SWISS 4->82 SDR1_ARATH 4e-08 40.5 %
:BLT:SWISS 71->226 CSGA_MYXXA 1e-26 42.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF06993.1 GT:GENE ABF06993.1 GT:PRODUCT short-chain dehydrogenase/reductase SDR GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 114493..115173 GB:FROM 114493 GB:TO 115173 GB:DIRECTION + GB:PRODUCT short-chain dehydrogenase/reductase SDR GB:PROTEIN_ID ABF06993.1 GB:DB_XREF GI:93352904 InterPro:IPR002198 InterPro:IPR002347 LENGTH 226 SQ:AASEQ MPTALVLGASRGLGLEFVRQYRADGWRVIAAARSDEGVAALTALGAEAHKLDLTDAAAVAGLAWKLDGETLDVAIYNAGVIGPRSETAEPVTREEFDAVMHTNVLGPMMALPVLLPFVESGNHGRGGVLAVLSSRMGSIGAMDSNRSWLYRVSKASVNAALKSVSLDARHAICVALHPGWVQTDMGGPKADLTPQQSVAGMRRVLAGVARHDNGSFHNYDGTSIPW GT:EXON 1|1-226:0| BL:SWS:NREP 2 BL:SWS:REP 4->82|SDR1_ARATH|4e-08|40.5|79/296| BL:SWS:REP 71->226|CSGA_MYXXA|1e-26|42.8|152/166| BL:PDB:NREP 1 BL:PDB:REP 50->226|1snyA|3e-19|35.6|174/241| RP:PDB:NREP 1 RP:PDB:REP 3->185|1a27A|1e-18|23.7|173/285| RP:PFM:NREP 1 RP:PFM:REP 4->168|PF00106|6e-12|36.9|157/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 3->159|PF00106|5.1e-19|29.7|145/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 3->185|1pwxA|8e-19|14.8|176/252|c.2.1.2| HM:SCP:REP 1->226|1snyA_|1.8e-83|41.3|225/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 1100 OP:NHOMOORG 514 OP:PATTERN ------------------------1--113---------------------1---------------- 111-41-1-------21--------1------22122123-4-1-1-3-11--21--1--2---2-21-1------------2----------------11----3-11-------------------------------------6222-----1112113121-1322111111111111111---22----11111----1111--1-----111------2------13-111111111--1111--------11-----------1---22------1111--------------1222222221222--------------2----------1-------------1--------------------1--211------11244--1-111-----------4-2212112331--1441313233-2--113332111-223--------22311111------------------------------23111---1-4553441111133631111124362223-13131-1231-41--13112211--------11121-1--11---1-1--------1--------11-----------------------------231321341--2331213411122133323---1121-------312211111-111111-111111111111111111---322----1---------------1111111--111111111111---1111-111111111-------1----1----------11--1223222134323223321---------233111111331--1211111111--------22--11------------------------------------1--11--1---11 --------21--11-66721242677222----423----------411A138548632233--2--1----8-421-11---------4I16-44----111745--83233339-------------------------------------7-7251-1-13121112-7A7A-111H42246211142213ICEJ5 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 226 STR:RPRED 100.0 SQ:SECSTR TEEEEEcccccHHHHHHHHHHHTcTTccEEEEEEEccGGGTHHHcEEEEEccTTcHHHHHHHHHTcTTccccEEEEcccccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTcEEEEEEEEGGGTcccTTcHcccTcHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEccccccTHHHHHTTccHHHHHHHHHHHHHHHTTccEEEEEEccccTTc PSIPRED ccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHccccEEEEcccccccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccHHcccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccHHHHHHHHHHHHHccccccccEEEEEccEEccc //