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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07009.1
DDBJ      :             TonB-dependent receptor
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  304/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
f.4.3
:719 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   59->583 2hdiA PDBj 2e-16 30.7 %
:RPS:PDB   56->719 1by3A PDBj 6e-30 13.4 %
:RPS:SCOP  59->719 1kmoA  f.4.3.3 * 2e-43 19.6 %
:HMM:SCOP  57->719 1nqeA_ f.4.3.3 * 3.3e-93 26.6 %
:RPS:PFM   77->175 PF07715 * Plug 1e-06 34.7 %
:HMM:PFM   457->717 PF00593 * TonB_dep_Rec 2.1e-28 18.6 258/277  
:HMM:PFM   71->175 PF07715 * Plug 1.8e-19 32.7 104/108  
:HMM:PFM   422->482 PF10677 * DUF2490 4.3e-05 25.0 60/194  
:BLT:SWISS 70->719 Y964_NEIMB 2e-43 27.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07009.1 GT:GENE ABF07009.1 GT:PRODUCT TonB-dependent receptor GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(128153..130312) GB:FROM 128153 GB:TO 130312 GB:DIRECTION - GB:PRODUCT TonB-dependent receptor GB:PROTEIN_ID ABF07009.1 GB:DB_XREF GI:93352920 InterPro:IPR000531 InterPro:IPR012910 LENGTH 719 SQ:AASEQ MFSNNTRIPAVRRTPLAALAALIVTSGVASHAMAQDNAAAAPAAPQTQPQPQPQTLKEVVVTANPLGSDLNEMVAPVSTLGGDALTVRQTSTLGETLNGMPGVTSTYFGPNASRPSIRGLDGDRIKLLQSGGSTLDASSLSYDHAVPIDPLVAEKVEVVRGPAALMYGGNALGGVVNVIDNRIPRDPVTGVSGAADVSGTIGGDKGRNASGLLEAGNGTFAVHADAFVRQTSDLRIPGFARSANLRATQPLPAGESEAYGTLPNTSSHQEGGSMGGSYTWADGFLGANYSTYRNDYGTPAEADARIKMRQDRIGLAGEARNLAGNTNGIIESVKGSFNYTDYEHREIEDGVTGTTFKNRGWDTRIEATHGKIGNMSGVIGTQFGHSDFSALGEEAFVPSTTTDNAALFVFEELPLISSGDLKLNLGGRIDHSSVKASANGNDRFTDDNRSFNAGSASAGLLYKLNPIWTVTSNLSYTERAPTFYELYANGPHLATNAYEIGDPNANKERATSIDLGMRFKQGDHSGSVSGYYSRFQNYLALLNTGTFRDAEGNVVTAGSDGALPVLQYAGVPATLYGFEAEGKTRLLQKMLTTGDTLDFEARADYVHGENRNNGEPLPRLAPLRLGGSLVYAAGPWGARINVDWNARQTRVPTGDTPTDAYTMLGVSLTYKLKVSGTQTLLYLRGDNLTNTEARSATSILRDIAPLPGRSVKIGMRTMF GT:EXON 1|1-719:0| BL:SWS:NREP 1 BL:SWS:REP 70->719|Y964_NEIMB|2e-43|27.7|635/758| SEG 38->55|aaaapaapqtqpqpqpqt| SEG 614->629|geplprlaplrlggsl| BL:PDB:NREP 1 BL:PDB:REP 59->583|2hdiA|2e-16|30.7|449/598| RP:PDB:NREP 1 RP:PDB:REP 56->719|1by3A|6e-30|13.4|636/695| RP:PFM:NREP 1 RP:PFM:REP 77->175|PF07715|1e-06|34.7|98/108|Plug| HM:PFM:NREP 3 HM:PFM:REP 457->717|PF00593|2.1e-28|18.6|258/277|TonB_dep_Rec| HM:PFM:REP 71->175|PF07715|1.8e-19|32.7|104/108|Plug| HM:PFM:REP 422->482|PF10677|4.3e-05|25.0|60/194|DUF2490| GO:PFM:NREP 4 GO:PFM GO:0004872|"GO:receptor activity"|PF07715|IPR012910| GO:PFM GO:0005215|"GO:transporter activity"|PF07715|IPR012910| GO:PFM GO:0006810|"GO:transport"|PF07715|IPR012910| GO:PFM GO:0016020|"GO:membrane"|PF07715|IPR012910| RP:SCP:NREP 1 RP:SCP:REP 59->719|1kmoA|2e-43|19.6|613/661|f.4.3.3| HM:SCP:REP 57->719|1nqeA_|3.3e-93|26.6|571/589|f.4.3.3|1/1|Porins| OP:NHOMO 465 OP:NHOMOORG 307 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------2212--------1211322311------------------------42------------------------------5------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-41-1112-------21114312111----------1-22222321--1--11----111111-421--3-1--1----------------3-------------------------------1344-211111111121111111--1111-111-11111111--1311411-3-22-12111-111111131211---11-1------------11-112-------111-2---111-----------------31-1133151--1222--12-11--1-1-----2121------21---3-1223122211-2111122111221112111111221-311111111111111111-----11--111111111111---1---------11113111--------11142132212--212445424-3121112111---------11112111112122232222221221111------1111------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------2-----------------------------1-----3---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 664 STR:RPRED 92.4 SQ:SECSTR #######################################################GGGEEcTTTcccEEGGGccccEEEEEHHHHHHHcccccGGGGTTcccEEccTTTTcccccccEETTcccGGGcccEEcccccccccTTccccccGGGEEEEEEEEcccHHHHccccTTEEEEEEEcccccccEEEEEEEEETTTEEEEEEEEEEEEEccEccccEEEEEEEEEEEEEcccTTcEEEEEEEEEEEEEcccTTEEEEEEEEEEEEEccccccccccccTTTcccTTcccccTTcccccTTcEEEEEEEEEEEEEEEEccccGcccEEEEEEEEEEEEEEEEEEEEEEEETTcGGGTTcHHHHTccTTGGGcEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEEcTTccccEETTcccccccccccccTTTEEEEEEEEEEEEETTEEEEEEEEEEEETTTccEEEEEEEEEEEEEEEEEccTTcEEcccccTTccccccEEEEEEEEEEEEcccccccEEEEEEEEEEEEEEEEEcccccccEEEEEEEEEEEEEEEEEEcccccEEEEEEEEEEEEEETTEEEEEEEEEEEEEEcTTTTTcccTTcccEEEEEEEEEEEEEEcccTTTTEEEEEEEEEEEccEEccTTEccEEEEEEEEEEEcTTTTccccEEEEEEcTTccccEEEEEETTEEEEccccEEEEEEEEEc DISOP:02AL 1-12,40-54| PSIPRED ccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEccccccHHHcccEEEEEcHHHHHHHccccHHHHHHHcccEEEEcccccccEEEEEEEccccEEEEEccEEEEccccccccccccccHHHcEEEEEEEcccccccccccccEEEEEEEcccccccccEEEEEEEEEEEEccccEEEEEEEEEccccEEEEEEEEEEEccccEEEccccccccccccccccccccccccEEEcccccccccEEEEEEEccccEEEEEEEEEccccccccccccEEEEEEEEEEEEEEEEEcccccccEEEEEEEEEEEEEEEEcEEcccccccEEEEEEEEEEEEEEccccccEEEEEEEEEEccccccccccccccccccEEEEEEEEEEEEEEEcccEEEEEEEEEEEEEEEEEccccccccccccccccEEEEEEEEEEEcccEEEEEEEEEEEEcccHHHHcccccccccccEEccccccccEEEEEEEEEEEEEcccEEEEEEEEEEEEccEEEEEEccccccccccEEEccccccEEEEEEEcccEEEEEEEEEEEEEEccccEEcccEEEEEEEEEEEEEEEccccccccccccEEEccEEEEccccEEEEEEEEEEEEEEEccccccccccEEEEEEEEEEEEcccccEEEEEEEEEEccccEEEEEccccccccccccEEEEEEEEEEc //