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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07035.1
DDBJ      :             exodeoxyribonuclease III (xth)
Swiss-Prot:             

Homologs  Archaea  28/68 : Bacteria  758/915 : Eukaryota  144/199 : Viruses  0/175   --->[See Alignment]
d.151.1
:258 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->256 2jc5A PDBj 3e-93 60.2 %
:RPS:PDB   2->256 1e9nA PDBj 2e-44 37.0 %
:RPS:SCOP  2->255 1bixA  d.151.1.1 * 1e-82 37.9 %
:HMM:SCOP  2->256 1akoA_ d.151.1.1 * 2.5e-73 41.8 %
:HMM:PFM   2->253 PF03372 * Exo_endo_phos 1.4e-42 19.8 248/276  
:BLT:SWISS 2->252 EXOA_BACSU 3e-49 39.4 %
:PROS 29->38|PS00726|AP_NUCLEASE_F1_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07035.1 GT:GENE ABF07035.1 GT:PRODUCT exodeoxyribonuclease III (xth) GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(153809..154585) GB:FROM 153809 GB:TO 154585 GB:DIRECTION - GB:PRODUCT exodeoxyribonuclease III (xth) GB:PROTEIN_ID ABF07035.1 GB:DB_XREF GI:93352946 InterPro:IPR000097 InterPro:IPR004808 InterPro:IPR005135 LENGTH 258 SQ:AASEQ MLRIISANLNGIRSASKKGFFEWMGKQEADMVCVQELKAQEADMTEAFLAPHGYHGYFHYAEKKGYSGVGLYTRHKPERVIIGFGNTEFDAEGRYVEVQYPHLAVISVYVPSGSSSEERQQAKFRFMEAFLPHLLELKASGREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEERAWIGELFDNHGYVDVFRQLDPRPEQYTWWSNRGQAYAKNVGWRIDYHLTTAKIAATAKATSIYKDEKFSDHAPLSIDYDFPL GT:EXON 1|1-258:0| BL:SWS:NREP 1 BL:SWS:REP 2->252|EXOA_BACSU|3e-49|39.4|246/252| PROS 29->38|PS00726|AP_NUCLEASE_F1_1|PDOC00598| SEG 225->236|ttakiaatakat| BL:PDB:NREP 1 BL:PDB:REP 1->256|2jc5A|3e-93|60.2|256/259| RP:PDB:NREP 1 RP:PDB:REP 2->256|1e9nA|2e-44|37.0|254/274| HM:PFM:NREP 1 HM:PFM:REP 2->253|PF03372|1.4e-42|19.8|248/276|Exo_endo_phos| RP:SCP:NREP 1 RP:SCP:REP 2->255|1bixA|1e-82|37.9|253/275|d.151.1.1| HM:SCP:REP 2->256|1akoA_|2.5e-73|41.8|251/268|d.151.1.1|1/1|DNase I-like| OP:NHOMO 1358 OP:NHOMOORG 930 OP:PATTERN ------1111111111-1-----1--------1-1---111112---1-1111--------111---- -11-22222222222--11-11--1211111-12221243-1112122121222222233111112222121111111111-----1111111111---212112223-2---------------11-111-1-11----------11-1111111111111111111111111111111111221----11-1111111-1-1-111-1----1111---11--11111111--------------------1211111121211221111111111111111111111111111111111111111111111111111111-1111111111111111---11111111--1--1111-1-1----1-11-1-1222432222232231122333222222222222-22222222332123323333333431212222323322222222222211222221121111111342222222222222111112232222222222222222222233222222223322322222223222232322222222222222222222222211111111111111-----1-111111211111111111111111111111--11122111122111111111111111111111111--21112------11111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111222221222111111111111111111111111122333322322333332221111111111111111111111113233333222211111111111111111111111-------------------------------------11 -1--111-1111-111-1-1111-11111-1111----1-1-1111--111---11-11111------------------------11-223-212111-111111-2312141111121112114131584-12211112115311-1121-11-12322312221211121232221F423223222-22113222- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 258 STR:RPRED 100.0 SQ:SECSTR cEEEEEEEcccHHHHHHTTHHHHHHHHcccEEEEEcccccGGGccTHHHHcccccEEEEEccccccccEEEEEcccccEEEEccccGGGcccccEEEEEccccEEEEEEcccccGGGTTHHHHHHHHHHHHHHHHHHTHHHccEEEEEEccccccGGGccccGGGTTcTTccHHHHHHHHHHHHHTTcEEHHHHHTTccccccEEccGGGTTTTTcEEccEEEEEcGGGGGGEEEEEEcTTccccccccEEEEEccHH PSIPRED cEEEEEEccccccHHHHHHHHHHHHHccccEEEEEEEEccHHHccHHHHHccccEEEEEccccccccEEEEEEEcccHHEEEcccccccccccEEEEEEEccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHcccEEEHHHHccccccEEEEcccccccccccccEEEEEEEEEEEEEcccccEEcccccccccccEEEEEEEcc //