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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07062.1
DDBJ      :             Lytic transglycosylase, catalytic
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  550/915 : Eukaryota  2/199 : Viruses  1/175   --->[See Alignment]
a.118.5d.2.1
:655 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   79->634 1qsaA PDBj 5e-48 26.9 %
:RPS:PDB   366->630 1d0lA PDBj 2e-26 14.0 %
:RPS:SCOP  480->641 1qsaA2  d.2.1.6 * 3e-30 35.8 %
:HMM:SCOP  48->479 1qsaA1 a.118.5.1 * 2e-108 37.3 %
:HMM:SCOP  480->646 1qsaA2 d.2.1.6 * 2.3e-50 39.5 %
:RPS:PFM   488->597 PF01464 * SLT 2e-10 40.6 %
:HMM:PFM   487->591 PF01464 * SLT 7e-21 33.3 102/121  
:BLT:SWISS 79->634 SLT_ECOLI 2e-47 26.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07062.1 GT:GENE ABF07062.1 GT:PRODUCT Lytic transglycosylase, catalytic GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 182381..184348 GB:FROM 182381 GB:TO 184348 GB:DIRECTION + GB:PRODUCT Lytic transglycosylase, catalytic GB:PROTEIN_ID ABF07062.1 GB:DB_XREF GI:93352973 InterPro:IPR008258 LENGTH 655 SQ:AASEQ MPKGVYLRRAGRFAWLAFAGALLATPVYAQKRTATPQKAVQQQPAALTIPSDPDDAFVALREAARKNDADRAAAISATLVDYPIPSYVEYFRIKSQMFDSSGQPLIDTPDAEISAFLQRYQGEAIADRMRNDWLLVLGKKRDWANFDVQYPQFVLKDDTQVECYALLSRALKGQNVAADARAMLVDPRYYGDGCVDLISYMAQSQQIQRGDVAFQARQALEQNYTTLAGKIAAALPDARVDGDSLATVVKMARNDPSQAAAYMGTISGNLSRDEQGAAWGVIGQFAAKKLMPEAAGYYRRQMDLGGNQWLSDESQEWRVRAALRQGDWKQVRQSIESMRPELRAKDPAWTYWYARALKADGRGSDAQQQFQSIAGQFNFYGQLASEELGNRITIPTRTTVSDAEAMAMRSRAGFTRAKKFYDLNLRFEGNREWNWELRGMNDRDLLAAAEYARKIELLDRTVNTSDRTKAEHDFTQRFPMPYRDIMQRATDDVGLDMAWAYGLIRQESRFIMNARSSAGAHGLMQVMPATAKYVARKIGMTDFSPSMMGDPNINIMLGTNYMSMVLTDLDSSWTLASAGYNAGPGRPKAWRTSLSRPVEGAIFAETIPFTETRNYVKNVLSNATYYAALMSGRPQSLKDRLGMVAPSAVTTTSLP GT:EXON 1|1-655:0| BL:SWS:NREP 1 BL:SWS:REP 79->634|SLT_ECOLI|2e-47|26.9|540/645| SEG 7->24|lrragrfawlafagalla| SEG 63->74|aarkndadraaa| BL:PDB:NREP 1 BL:PDB:REP 79->634|1qsaA|5e-48|26.9|540/618| RP:PDB:NREP 1 RP:PDB:REP 366->630|1d0lA|2e-26|14.0|250/314| RP:PFM:NREP 1 RP:PFM:REP 488->597|PF01464|2e-10|40.6|106/113|SLT| HM:PFM:NREP 1 HM:PFM:REP 487->591|PF01464|7e-21|33.3|102/121|SLT| RP:SCP:NREP 1 RP:SCP:REP 480->641|1qsaA2|3e-30|35.8|162/168|d.2.1.6| HM:SCP:REP 48->479|1qsaA1|2e-108|37.3|416/0|a.118.5.1|1/1|Bacterial muramidases| HM:SCP:REP 480->646|1qsaA2|2.3e-50|39.5|167/168|d.2.1.6|1/1|Lysozyme-like| OP:NHOMO 726 OP:NHOMOORG 553 OP:PATTERN -------------------------------------------------------------------- -11-----------------------------------------1-----------------1-------------------11-111------------------1-----------------------------11111---121111111111111111111111111-1-----1------------211-----1---------111112--111111--------22------------------------------------------------------------------------------------------13121222222212121221111-21112-122222122-1222211----1-32221111111211111111111111-111112-11112211112-111211111121111113111211121222222222432221211--------111111111111111----1232321111111111111111111111111111111111122211111222111211121122111111111111341111-1--2-1-113322333142232322----11----111-1111111-2-1-11111111111121211121222212222121--3-111------11112111111111111-111111111111111111111111111111111111111111121111111--111111111111---1-----1111-1-1-111111111111--1222222222122111121212222211112111111111222111-111111122222222222222--332211111111111111--------------------------1-----1----1- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-----1---- ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ STR:NPRED 541 STR:RPRED 82.6 SQ:SECSTR ##############################################################################GTTcTTHHHHHHHHHHHT########GGGccHHHHHHHHHHcTTcHHHHHHHHHHHHHHHHTTcHHHHHHHccc##ccccHHHHHHHHHHHHHTTcHHHHHHHHHHcccccccTHHHHHHHHHHHTTcccHHHHHHHHHHHHHTTcHHHHHHHHHTcc###GGGHHHHHHHHHHHHcGGGHHHHHHHcccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHTTccHHcccTT#ccHHHHHHHHHHHHHHTcHHHHHHHHHHccTTGGGcHH#HHHHHHHHHHHTTcHHHccccccTTTTcHHHHHHHHHHHHHHcccccccccccHHHHHHHHHcccccHHHHHHHHHTccccccHHHHHHHHHccHHHHHHHHHHHTHHHHHHHHTTTTccccEEHHHHHHHHHHHHHccGGGHHHHHHHHHHHHHHHHHTTccTTTEcTTcccTTTTccHHHHHHHcccTTcccTccccTTcHHHHHHHHHHHHHHTTccTTcccEEEEHHEcccccccccTTccEEHHHHHHTcEEccccTccEEEEEEEEccccEEEEEETccc##################### DISOP:02AL 1-2,30-45,342-342,399-413,649-656| PSIPRED cccHHHHHHccHHHHHHHHHHHHHcHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccHHHHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccHHHHHHHHHHccHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHccccccccccccccccccHHcccHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccccccEEEEEEcHHHHHHHHHHcccccccHHHHccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHcccccccccccccc //