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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07084.1
DDBJ      :             cation diffusion facilitator family transporter
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  254/915 : Eukaryota  123/199 : Viruses  0/175   --->[See Alignment]
d.52.9f.59.1
:382 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   109->175 2qfiA PDBj 1e-04 35.9 %
:RPS:PDB   285->364 3byrA PDBj 2e-08 19.0 %
:RPS:SCOP  47->287 2qfiA2  f.59.1.1 * 7e-18 17.8 %
:RPS:SCOP  290->361 3bypA1  d.52.9.1 * 2e-08 19.7 %
:RPS:PFM   53->360 PF01545 * Cation_efflux 8e-27 33.6 %
:HMM:PFM   54->362 PF01545 * Cation_efflux 9.4e-62 28.6 269/285  
:BLT:SWISS 38->361 CZCD_BACSU 9e-17 29.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07084.1 GT:GENE ABF07084.1 GT:PRODUCT cation diffusion facilitator family transporter GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(206274..207422) GB:FROM 206274 GB:TO 207422 GB:DIRECTION - GB:PRODUCT cation diffusion facilitator family transporter GB:PROTEIN_ID ABF07084.1 GB:DB_XREF GI:93352995 InterPro:IPR002524 LENGTH 382 SQ:AASEQ MKALSTAHAATLRAYFKPDPTHPDCTAMHTQNLSAWTHSHVFDAGNQAAERGTRLVMWITLAMMIVEIAAGLVFNSMALLADGWHMSSHALAIGLSAFAYAAARRLSQDGRFSFGTWKIEVLAAFASAIFLLGVAGLMVFGSVERLFTPQPIHYQEAMAITAIGLIVNLACALILGGAHHGHDHGHGHDHGHQAHGHDHHDHGHGHGHGHGGHDDHGHRHHDINLRSAYLHVVADAATSVLAIVALAGGWWLGWSWLDPVMGLVGAVLVGRWAIGLMRQSGTVLLDREMDHPVVEEVREVLAQFSHGEDGTRVADLHVWRVGREKFACIASLVTHDASLTPQRVRHALSIHDELVHVSVEINQCDDGRDGHDGHAAHRGHRH GT:EXON 1|1-382:0| BL:SWS:NREP 1 BL:SWS:REP 38->361|CZCD_BACSU|9e-17|29.3|276/311| TM:NTM 5 TM:REGION 55->77| TM:REGION 120->142| TM:REGION 156->177| TM:REGION 230->252| TM:REGION 256->278| SEG 176->222|ggahhghdhghghdhghqahghdhhdhghghghghgghddhghrhhd| SEG 241->257|laivalaggwwlgwswl| SEG 365->381|ddgrdghdghaahrghr| BL:PDB:NREP 1 BL:PDB:REP 109->175|2qfiA|1e-04|35.9|64/286| RP:PDB:NREP 1 RP:PDB:REP 285->364|3byrA|2e-08|19.0|79/89| RP:PFM:NREP 1 RP:PFM:REP 53->360|PF01545|8e-27|33.6|268/282|Cation_efflux| HM:PFM:NREP 1 HM:PFM:REP 54->362|PF01545|9.4e-62|28.6|269/285|Cation_efflux| GO:PFM:NREP 4 GO:PFM GO:0006812|"GO:cation transport"|PF01545|IPR002524| GO:PFM GO:0008324|"GO:cation transmembrane transporter activity"|PF01545|IPR002524| GO:PFM GO:0016020|"GO:membrane"|PF01545|IPR002524| GO:PFM GO:0055085|"GO:transmembrane transport"|PF01545|IPR002524| RP:SCP:NREP 2 RP:SCP:REP 47->287|2qfiA2|7e-18|17.8|202/204|f.59.1.1| RP:SCP:REP 290->361|3bypA1|2e-08|19.7|71/82|d.52.9.1| OP:NHOMO 476 OP:NHOMOORG 382 OP:PATTERN ------------------------1-----------------------1--1---11----------- -1----1-------111-------11-----11---1------------------------1---1--1-----------------------------------------------------------1-----11-------1--1----------------------------------------------1-----11--------1-11----1221-1-11111111111111111111111112211-----------------------111-------2--11111111111-------------1--111-----------------------------------------------------1-111--1------11-1-----1-1----------1-------1-111-111111111111-11----21-11-----------1----211--111111------------------1-1--111--11--1111111----11--1111-1-111111-124111-1121--1-11-1--1--------1-2-1-1-11---1---------------1-1111-1--1--1----------------1----11111-1-1----1111111111111111111--------------------------------------------------1-1-----------------------------------------------11111-----2-1----1-----------1111111-111-1111-111---121--1-------------1-----111112212122111------1-------------------------------------------11----------- ----211-211-------111111111-1----111--------1111111111-2211----1111----11--11111-22212-1-----111211-1--421----2111122122--1-3124-492-214111-3-2212112-2-17-3212---121114---3112111-----123114-31--121-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 142 STR:RPRED 37.2 SQ:SECSTR ############################################################################################################cTTccccccTHHHHHHHTTTTTTcccTTGGGcccTTccTTTccc###cTTTccccccGGGcccGGGG##############################################################################################################cccccHHHHHHHHHHHHHHTT#TTccEEEEEEEEEETTEEEEEEEEEccTTccHHHHHHHHHHHHHcTTEEEEEEEEcG################## DISOP:02AL 1-4,6-7,13-52,371-371,373-383| PSIPRED cccccccccccHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccccccEEEcccEEEcccEEEEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEEccccccccccHHHHccccc //