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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07089.1
DDBJ      :             putative signal peptide protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  65/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.4.1
:226 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   117->219 2ervB PDBj 2e-13 39.2 %
:RPS:SCOP  82->226 1qj8A  f.4.1.1 * 2e-07 15.3 %
:HMM:SCOP  66->226 1p4tA_ f.4.1.1 * 7.5e-09 15.2 %
:RPS:PFM   129->216 PF09411 * PagL 3e-16 46.0 %
:HMM:PFM   82->226 PF09411 * PagL 5.3e-42 37.0 138/139  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07089.1 GT:GENE ABF07089.1 GT:PRODUCT putative signal peptide protein GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 211952..212632 GB:FROM 211952 GB:TO 212632 GB:DIRECTION + GB:PRODUCT putative signal peptide protein GB:PROTEIN_ID ABF07089.1 GB:DB_XREF GI:93353000 LENGTH 226 SQ:AASEQ MAAYAVPFDVRCRANLSSMSMNKKTEQQEHHMPPANLSRKLPSARLLAIAALVAGASSAASAEELVGWAHPAVQAAFARDTDHGINKYEIAVNFNTPIQYGNPDGWLFRLQAEANMGYWDARSGTNRQNLMEFGLTPILRVEKRGGYFVPFLEAGVGLRLLTHTSTSDQHNFSTAFQFGDMVGLGVGFGKNAATEVGMRFQHISNAGIKEPNPGTNLYTGYVRYRF GT:EXON 1|1-226:0| SEG 43->67|sarllaiaalvagassaasaeelvg| BL:PDB:NREP 1 BL:PDB:REP 117->219|2ervB|2e-13|39.2|97/146| RP:PFM:NREP 1 RP:PFM:REP 129->216|PF09411|3e-16|46.0|87/138|PagL| HM:PFM:NREP 1 HM:PFM:REP 82->226|PF09411|5.3e-42|37.0|138/139|PagL| RP:SCP:NREP 1 RP:SCP:REP 82->226|1qj8A|2e-07|15.3|137/148|f.4.1.1| HM:SCP:REP 66->226|1p4tA_|7.5e-09|15.2|145/0|f.4.1.1|1/1|OMPA-like| OP:NHOMO 79 OP:NHOMOORG 65 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-11111111111111111111111132221--111--1111---2-----2---1----------21--------------------------------------------------------------1----1-2---------------------------------------------------------------------------------------------------------------------------------------------------------------1-11111111122231-11---------1--------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 100 STR:RPRED 44.2 SQ:SECSTR ####################################################################################################################EEEEEEccccEEEEEEEEEEEEEEEEEccccEEEEEEEEEEEEEEcccEETTE#EccccEEEEEEEEEEEEETTccE##EEEEEEEEEcTTccTTcccEEEEE####### DISOP:02AL 1-2,18-35| PSIPRED cccEEEEEEEEEEccccccccccHHHHHHHcccHHHHHHccccHHHHHHHHHHccccccccHHHHHHHcccEEEEEEEEcccccEEEEEEEEEEcccccccccccEEEEEEEcEEEEEEEccccccccccccEEEEEEEEEEEcccEEccEEEEEEEEEEEccccccccccccccEEEccEEEEEEEEcccccEEEEEEEEEEEccccccccccccEEEEEEEEcc //