[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07173.1
DDBJ      :             peptidyl-tRNA hydrolase
Swiss-Prot:PTH_RALME    RecName: Full=Peptidyl-tRNA hydrolase;         Short=PTH;         EC=3.1.1.29;

Homologs  Archaea  0/68 : Bacteria  902/915 : Eukaryota  80/199 : Viruses  0/175   --->[See Alignment]
c.56.3
:198 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->173 2pthA PDBj 1e-38 51.8 %
:RPS:SCOP  2->196 2pthA  c.56.3.1 * 4e-69 54.0 %
:HMM:SCOP  1->200 2pthA_ c.56.3.1 * 1.3e-62 46.9 %
:RPS:PFM   4->191 PF01195 * Pept_tRNA_hydro 7e-53 55.0 %
:HMM:PFM   4->194 PF01195 * Pept_tRNA_hydro 2.8e-65 45.9 183/184  
:BLT:SWISS 1->198 PTH_RALME e-109 100.0 %
:PROS 15->28|PS01195|PEPT_TRNA_HYDROL_1
:PROS 109->119|PS01196|PEPT_TRNA_HYDROL_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07173.1 GT:GENE ABF07173.1 GT:PRODUCT peptidyl-tRNA hydrolase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(303018..303614) GB:FROM 303018 GB:TO 303614 GB:DIRECTION - GB:PRODUCT peptidyl-tRNA hydrolase GB:PROTEIN_ID ABF07173.1 GB:DB_XREF GI:93353084 InterPro:IPR001328 LENGTH 198 SQ:AASEQ MIKLIVGLGNPGAEYEATRHNAGFWLVDQLARMGGTTLRVESRFHGLAGRARLWDQDVWLLKPSTFMNRSGLSVVSLARFYKILPDEIVVAHDEMDLPAGSAKLKRGGGSGGHNGLKDISAHLTTQDYWRLRIGVGHPRNAPGGAAGGREDVVNFVLKPPRKEEQQAIDEAIDRCIGPLGTLARGESERAMMELHTGR GT:EXON 1|1-198:0| SW:ID PTH_RALME SW:DE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; SW:GN Name=pth; OrderedLocusNames=Rmet_0287; SW:KW Complete proteome; Cytoplasm; Hydrolase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->198|PTH_RALME|e-109|100.0|198/198| GO:SWS:NREP 2 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| PROS 15->28|PS01195|PEPT_TRNA_HYDROL_1|PDOC00920| PROS 109->119|PS01196|PEPT_TRNA_HYDROL_2|PDOC00920| SEG 141->148|apggaagg| BL:PDB:NREP 1 BL:PDB:REP 2->173|2pthA|1e-38|51.8|164/193| RP:PFM:NREP 1 RP:PFM:REP 4->191|PF01195|7e-53|55.0|180/183|Pept_tRNA_hydro| HM:PFM:NREP 1 HM:PFM:REP 4->194|PF01195|2.8e-65|45.9|183/184|Pept_tRNA_hydro| GO:PFM:NREP 2 GO:PFM GO:0004045|"GO:aminoacyl-tRNA hydrolase activity"|PF01195|IPR001328| GO:PFM GO:0006412|"GO:translation"|PF01195|IPR001328| RP:SCP:NREP 1 RP:SCP:REP 2->196|2pthA|4e-69|54.0|187/193|c.56.3.1| HM:SCP:REP 1->200|2pthA_|1.3e-62|46.9|192/193|c.56.3.1|1/1|Peptidyl-tRNA hydrolase-like| OP:NHOMO 1033 OP:NHOMOORG 982 OP:PATTERN -------------------------------------------------------------------- 1111122222221111111-111111111111111111111111-11-1111111111111111111111111111111111-11111111111111--1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111131111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111122222221111111111111111-11111111111111111111111-11111111 ----11------1121-11----------------------------1---------------2-1--1-11--1----11-11111---11--11-------11---211-211111----1-11111151-11--1----113-1---1--1--1-2----11--------1-11116111212456-41--1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 182 STR:RPRED 91.9 SQ:SECSTR #ccEEEEcccccTTTTTcGGGHHHHHHHHHHHHHTcccEEEGGGTEEEEEEEETTEEEEEEEEcccGGGTHHHHHHHHHHHTccGGGEEEEEEETTccTTcEEEEEccccTTcHHHHHHHHHTcccccEEEEEEcccccc######cTHHHHHHHHTccccHHHHHHHHHHHHHHHHHHHHHHHccHHH######### DISOP:02AL 109-110,142-146,197-199| PSIPRED cEEEEEEcccccHHHHccccHHHHHHHHHHHHHHcccccccccccEEEEEEEEccEEEEEEEcccHHHHcHHHHHHHHHHHcccHHHEEEEEEcccccccEEEEEccccccccccHHHHHHHHccccccEEEEEcccccccccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccc //