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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07209.1
DDBJ      :             phage integrase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  14/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.163.1
:342 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   167->224 2a3vB PDBj 2e-04 38.0 %
:RPS:PDB   8->206 3c28B PDBj 3e-07 12.4 %
:RPS:SCOP  168->212 1crxA2  d.163.1.1 * 3e-05 13.3 %
:HMM:SCOP  1->211 1a0pA2 d.163.1.1 * 3.5e-08 21.3 %
:RPS:PFM   64->126 PF02171 * Piwi 8e-04 31.7 %
:HMM:PFM   108->201 PF00589 * Phage_integrase 1.7e-10 23.0 74/173  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07209.1 GT:GENE ABF07209.1 GT:PRODUCT phage integrase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 341083..342111 GB:FROM 341083 GB:TO 342111 GB:DIRECTION + GB:PRODUCT phage integrase GB:PROTEIN_ID ABF07209.1 GB:DB_XREF GI:93353120 InterPro:IPR002104 LENGTH 342 SQ:AASEQ MAVLRAALASDRSQERAHVMQRAAIALSLAYGRNPSNYCLLREEDLSNQLAGFDVPPQWILSIPRIKKWGIGVRQQFAQERVSNDLLPLIHELLAANGSIDCKGYPRPLFMRDSVDEWRADTGVEEYAYHMTGKEFLALIRGFATRMAIESPRTGSQLRLSSRRLRYTFATTMVELGASKTVLATMLDHSDTQHVRVYYSLKGARLTRILDRAAALRLGPLMKLFKGTPIGVDSEAAKDTRQEKRVRFVGDVEVIDPVEIGACGQSPHCSLDPPFSCYVCPKFQPYLEADHQAVLDALLKGRDERRGRLGMRLSVQMDEVIYAVAEVVQLVAHHAKRNGGKA GT:EXON 1|1-342:0| SEG 156->166|sqlrlssrrlr| BL:PDB:NREP 1 BL:PDB:REP 167->224|2a3vB|2e-04|38.0|50/320| RP:PDB:NREP 1 RP:PDB:REP 8->206|3c28B|3e-07|12.4|185/315| RP:PFM:NREP 1 RP:PFM:REP 64->126|PF02171|8e-04|31.7|63/300|Piwi| HM:PFM:NREP 1 HM:PFM:REP 108->201|PF00589|1.7e-10|23.0|74/173|Phage_integrase| RP:SCP:NREP 1 RP:SCP:REP 168->212|1crxA2|3e-05|13.3|45/212|d.163.1.1| HM:SCP:REP 1->211|1a0pA2|3.5e-08|21.3|178/182|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 14 OP:NHOMOORG 14 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------111-------------------------------------------------------------------1--------------------------------------------------------------------------1---------1------------1---11----------1----------------1--------------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 224 STR:RPRED 65.5 SQ:SECSTR HHHHHHHHHHTTcccHHHHHHHHHHHHHHHHcccHHHHHHccGGGEEEcTTccEEEEEcccccccccccEEEEccHHEEEEccHHHHHHHHHHHHHHTGGGcTTccccccccTTcccccccccccHHHHHHHHHHHHHHHHccccccccTTccccTTHHccTTHHHHHHHHHHHHTTccHHHHHHHTTccccHHHHHHHcccHHHHcHHHHHGGTccccGGGTc###################################################################################################################### DISOP:02AL 1-1,237-241,306-307,335-343| PSIPRED cHHHHHHHccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccEEEEEEccHHccccccHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHccccccccccEEcHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHcccEEcccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccc //