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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07240.1
DDBJ      :             L-threonine ammonia-lyase
Swiss-Prot:             

Homologs  Archaea  38/68 : Bacteria  676/915 : Eukaryota  182/199 : Viruses  0/175   --->[See Alignment]
c.79.1d.58.18
:565 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   63->565 1tdjA PDBj e-122 50.6 %
:RPS:PDB   69->373 2d1fA PDBj 9e-55 17.1 %
:RPS:SCOP  63->376 1tdjA1  c.79.1.1 * 4e-68 49.0 %
:RPS:SCOP  396->474 1tdjA2  d.58.18.2 * 5e-33 54.4 %
:RPS:SCOP  475->565 1tdjA3  d.58.18.2 * 2e-34 48.6 %
:HMM:SCOP  51->419 1e5xA_ c.79.1.1 * 1.5e-104 33.2 %
:HMM:SCOP  388->474 1tdjA2 d.58.18.2 * 2.5e-27 39.1 %
:HMM:SCOP  470->566 1tdjA3 d.58.18.2 * 2e-31 49.5 %
:RPS:PFM   88->358 PF00291 * PALP 9e-19 31.3 %
:RPS:PFM   396->470 PF00585 * Thr_dehydrat_C 9e-11 35.5 %
:RPS:PFM   484->564 PF00585 * Thr_dehydrat_C 2e-18 50.6 %
:HMM:PFM   78->368 PF00291 * PALP 4.8e-73 36.8 277/297  
:HMM:PFM   381->470 PF00585 * Thr_dehydrat_C 3e-30 43.3 90/91  
:HMM:PFM   480->564 PF00585 * Thr_dehydrat_C 8.3e-29 43.5 85/91  
:BLT:SWISS 63->565 THD1_BURM1 0.0 72.0 %
:PROS 101->114|PS00165|DEHYDRATASE_SER_THR
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07240.1 GT:GENE ABF07240.1 GT:PRODUCT L-threonine ammonia-lyase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(373822..375519) GB:FROM 373822 GB:TO 375519 GB:DIRECTION - GB:PRODUCT L-threonine ammonia-lyase GB:PROTEIN_ID ABF07240.1 GB:DB_XREF GI:93353151 InterPro:IPR000634 InterPro:IPR001721 InterPro:IPR001926 InterPro:IPR005787 LENGTH 565 SQ:AASEQ MSAGRCPTTVAVTAPVARQLPTWHCQVRHPLSLAVSADFSGFFAAAPRRRTPQTMTRTPAKPDYLKKILTAKVYDVAQETELTYAPALSARTGNAVWFKREDTQPVFSFKLRGAYNKMASLTPEELKRGVIAASAGNHAQGVALAAARMQCKAIIAMPTTTPQVKIDAVRERGGEWVQIVLHGESYSDAYLHAAELEKKHKLAFIHPFDDPEVIAGQGTIAMEILRQHPGPIHAIFVAIGGGGLISGIAAYVKAVRPEIKVIGVQTFDSDAMKRSVDAGKRVELKDVGLFSDGTAVKLVGKETFRITRELVDDIILVDTDAICAGLKDVFQDTRSILEPAGALAVAGLKAYAEREKLKHQHLVAIACGANMNFDRLRFVAERAEVGEAREAVFAVTIPEERGSFKRFCEQVGTRSVTEFNYRIADKGVAHIFVGVQIASRAESDKIAANFRRHGFDTLDLSNDELAKQHIRYMVGGHSPLAHDELLYRFEFPERPGALMKFLSSMSPNWNISLFHYRNQGADTSNILVGIQVPKNEKRAFRSFLSTLGYVHWDETDNPVYKLFLS GT:EXON 1|1-565:0| BL:SWS:NREP 1 BL:SWS:REP 63->565|THD1_BURM1|0.0|72.0|503/507| PROS 101->114|PS00165|DEHYDRATASE_SER_THR|PDOC00149| SEG 44->60|aaaprrrtpqtmtrtpa| SEG 238->250|aigggglisgiaa| SEG 377->395|rfvaeraevgeareavfav| BL:PDB:NREP 1 BL:PDB:REP 63->565|1tdjA|e-122|50.6|482/494| RP:PDB:NREP 1 RP:PDB:REP 69->373|2d1fA|9e-55|17.1|298/349| RP:PFM:NREP 3 RP:PFM:REP 88->358|PF00291|9e-19|31.3|262/293|PALP| RP:PFM:REP 396->470|PF00585|9e-11|35.5|75/91|Thr_dehydrat_C| RP:PFM:REP 484->564|PF00585|2e-18|50.6|81/91|Thr_dehydrat_C| HM:PFM:NREP 3 HM:PFM:REP 78->368|PF00291|4.8e-73|36.8|277/297|PALP| HM:PFM:REP 381->470|PF00585|3e-30|43.3|90/91|Thr_dehydrat_C| HM:PFM:REP 480->564|PF00585|8.3e-29|43.5|85/91|Thr_dehydrat_C| GO:PFM:NREP 7 GO:PFM GO:0003824|"GO:catalytic activity"|PF00291|IPR001926| GO:PFM GO:0008152|"GO:metabolic process"|PF00291|IPR001926| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00291|IPR001926| GO:PFM GO:0004794|"GO:L-threonine ammonia-lyase activity"|PF00585|IPR001721| GO:PFM GO:0009097|"GO:isoleucine biosynthetic process"|PF00585|IPR001721| GO:PFM GO:0004794|"GO:L-threonine ammonia-lyase activity"|PF00585|IPR001721| GO:PFM GO:0009097|"GO:isoleucine biosynthetic process"|PF00585|IPR001721| RP:SCP:NREP 3 RP:SCP:REP 63->376|1tdjA1|4e-68|49.0|310/331|c.79.1.1| RP:SCP:REP 396->474|1tdjA2|5e-33|54.4|79/88|d.58.18.2| RP:SCP:REP 475->565|1tdjA3|2e-34|48.6|74/75|d.58.18.2| HM:SCP:REP 51->419|1e5xA_|1.5e-104|33.2|364/477|c.79.1.1|1/1|Tryptophan synthase beta subunit-like PLP-dependent enzymes| HM:SCP:REP 388->474|1tdjA2|2.5e-27|39.1|87/0|d.58.18.2|1/2|ACT-like| HM:SCP:REP 470->566|1tdjA3|2e-31|49.5|91/91|d.58.18.2|2/2|ACT-like| OP:NHOMO 1674 OP:NHOMOORG 896 OP:PATTERN 11--1111111111111211111-31122121---------------1-------1----11111-11 225-111122111121111-121112111111222213221111111-111111111111221-333131-1111111-------------1-1---11-1112111221--------------------------33344---111-11--11---11111111-1222-1111111111114211111-12122222222122222221111122122311--1111111112222222222222211111----11-----------1-1-1-1-1-------11111111111111-------------111111111--21-11111111111-111111111-1-1111122-11-1-2------114-12222-11-111434111122121111-11-113-11311313451-3332548354232322235313223341111111131111-22----------111111111111111-----214213553445555544443444444443436523331133312544524254112111121111111111221111--1---11-----11111111-111121-111111111111-1-------11-1111112211212111111121111111111111--11112------21111222222222222-2222222222222222222222321222222222222222222422222221-42222222222211-----------11432111111-111-111133233212211144444342253452232---------11111111111111122222221321111-11-11-----------------------1--------1------------11111-31 ----332----12223222333342442222123331211111122322345574321222331111121111111222211112111-24121111121111422-283E373311--1113194-3-3A2-21111-1112121111-11153222699539514212423422254G2235422132223253345 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 487 STR:RPRED 86.2 SQ:SECSTR #############################################################HHHHHHHcccccccccccccEEEcHHHHHHHccEEEEEEGGGcTTccTTHHHHHHHHHHHHHTTccEEEEccccHHHHHHHHHHHHHTcEEEEEEccccccHHHHHHHHHTTcEEcEEEEccccHHHHHHHHHHHHHHcTTEEEccTTcHHHHHHHTHHHHHHHHHHccccccccHHHHHHHHHHHHHHHTTccccccEEEEEEEGGGcHHHcHHHHcccccccccccGGGcccccTTHHHHHHHHHHHTcEEEEEcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHTccTTcEEEEEEcccGGGcHHHHHHTTccTTcccTTccccccccccHHHHHHHHHHHTcccccEEEEEcccccccEEEEEEEcccTHHHHHHHHHHTccccEEETTcccHHHHHTGGGTcccccccccccEEEEEEccccTTHHHHHHHHHcccccccEEEcccTTTccccEEEEEc#################cEEEEcTTcHHHHHHTc DISOP:02AL 1-5,53-56| PSIPRED ccccccccEEEEEccHHHccccEEEEEcccEEEEEEcccccHHcccccccccccccccccccHHHHHHHHHHHHHHcccccEEEcccccHHHccEEEEEEcccccccEEHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHcccEEEEEEEccccHHHHHHHHHHHHHccccEEEcccccHHHHHHHHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHccccEEccccccHHHccccccccHHHHHHHHHcccEEEEEcHHHHHHHHHHHHHHcccEEccHHHHHHHHHHHHHHcccccccEEEEEEccccccHHHHHHHHHHHHHHHHHcEEEEEEccccccHHHHHHHHHcccccEEEEEEEccccEEEEEEEEEEccHHHHHHHHHHHHHccccEEEccccHHHHHHHHHHcccccccccccEEEEEEccccccHHHHHHHHHcccccEEEEEEEccccccccEEEEEEccHHHHHHHHHHHHHccccEEEEcccHHHHHHcc //