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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07272.1
DDBJ      :             3-hydroxyacyl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  35/68 : Bacteria  557/915 : Eukaryota  159/199 : Viruses  0/175   --->[See Alignment]
a.100.1b.55.1c.14.1c.2.1
:808 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->293 3hadB PDBj 7e-32 36.7 %
:RPS:PDB   8->37 3ckyC PDBj 9e-04 40.0 %
:RPS:PDB   55->297 1e9yA PDBj 6e-30 12.3 %
:RPS:PDB   349->403 3ctvA PDBj 4e-08 34.5 %
:RPS:PDB   480->617 1dubA PDBj 1e-11 15.1 %
:RPS:SCOP  8->181 1dliA2  c.2.1.6 * 3e-16 15.2 %
:RPS:SCOP  194->295 1f0yA1  a.100.1.3 * 2e-22 26.5 %
:RPS:SCOP  311->412 1qqgA2  b.55.1.2 * 2e-13 21.3 %
:RPS:SCOP  479->805 1wdkA4  c.14.1.3 * 1e-19 16.5 %
:HMM:SCOP  3->192 1f0yA2 c.2.1.6 * 4e-44 41.2 %
:HMM:SCOP  192->332 1wdkA1 a.100.1.3 * 2.1e-20 35.2 %
:HMM:SCOP  342->466 1wdkA1 a.100.1.3 * 1.6e-19 22.8 %
:HMM:SCOP  492->807 1wdkA4 c.14.1.3 * 3e-32 27.6 %
:RPS:PFM   8->191 PF02737 * 3HCDH_N 3e-26 42.3 %
:RPS:PFM   237->293 PF00725 * 3HCDH 2e-08 47.2 %
:RPS:PFM   361->387 PF00725 * 3HCDH 5e-04 55.6 %
:RPS:PFM   496->613 PF00378 * ECH 2e-06 31.2 %
:HMM:PFM   8->191 PF02737 * 3HCDH_N 3.6e-49 36.0 175/180  
:HMM:PFM   194->293 PF00725 * 3HCDH 1.4e-14 31.6 95/97  
:HMM:PFM   501->635 PF00378 * ECH 6.1e-15 33.9 124/170  
:BLT:SWISS 6->808 FADN_BACSU e-122 37.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07272.1 GT:GENE ABF07272.1 GT:PRODUCT 3-hydroxyacyl-CoA dehydrogenase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 412352..414778 GB:FROM 412352 GB:TO 414778 GB:DIRECTION + GB:PRODUCT 3-hydroxyacyl-CoA dehydrogenase GB:PROTEIN_ID ABF07272.1 GB:DB_XREF GI:93353183 InterPro:IPR000205 InterPro:IPR001753 InterPro:IPR006108 InterPro:IPR006176 LENGTH 808 SQ:AASEQ MSNFIVKKVAVLGAGVMGAQIAAHLINARVPVILFDLPAKEGPKNGIADRAIENLKKLSPAPLGIKEEAGLIRAANYEDDIALLKECDVVIEAIAERMDWKHDLYKKVSPHLAPNAIFATNTSGLSITALSDGFDADLKSRFCGVHFFNPPRYMHLVELIPTATTKPEILDRLESFLTTSLGKGVVRAKDTSNFIANRVGIFSILAVFAEAEKFGIPFDIVDDLTGTKLGRAKSATFRTADVVGLDTMAHVIKTMQDNLTDDPFAPVYKTPAVLKGLVDAGALGQKTGAGFYKKEGKAIKVLDAKSGQYVESGKKADEIVVRILKKEPAERIKLLRESTNPQAQFLWGVFRDVFHYIAVYLEQIAGSAADIDLAIRWGFGWNSGPFEDWQAAGWKQVAEWVKEDVEAGKALSNAPLPAWVLNGAVAENGGVHGAQGSWSPAASAFVKRAELPVYQRQVFRAALKGTDSPDPRRAGKTIEENDGARIWTTDGADDVLVISFKSKMNTVGPDVLDTIVRAVELAEASYKGLVVWQPTSLQLGAPGGPFSAGANLEAAMPAFMMGGAKGIEPFVKKFQDTMMRVKYAAVPVVPAVSGIALGGGCELMLHSAKRVVALESYVGLVEVGVGLVPAGGGLKEAAIAAAKAAQAAGSTNYLNFITNRFQAAAMAKVSSSALDAQKIGYVQPTDTIVYNVHELLYVAQNEVRALANAGYRAPLPGQLIPVAGRSGIATIKASLVNMRDGNFISAHDFLIASRIAEVVCGGDVEAGSLVSEDWLLALERRAFIDLLGNGKTQERIMGMLQTGKPVRN GT:EXON 1|1-808:0| BL:SWS:NREP 1 BL:SWS:REP 6->808|FADN_BACSU|e-122|37.3|761/789| SEG 584->592|aavpvvpav| SEG 618->649|vglvevgvglvpaggglkeaaiaaakaaqaag| BL:PDB:NREP 1 BL:PDB:REP 5->293|3hadB|7e-32|36.7|275/291| RP:PDB:NREP 4 RP:PDB:REP 8->37|3ckyC|9e-04|40.0|30/296| RP:PDB:REP 55->297|1e9yA|6e-30|12.3|228/238| RP:PDB:REP 349->403|3ctvA|4e-08|34.5|55/90| RP:PDB:REP 480->617|1dubA|1e-11|15.1|126/260| RP:PFM:NREP 4 RP:PFM:REP 8->191|PF02737|3e-26|42.3|175/180|3HCDH_N| RP:PFM:REP 237->293|PF00725|2e-08|47.2|53/97|3HCDH| RP:PFM:REP 361->387|PF00725|5e-04|55.6|27/97|3HCDH| RP:PFM:REP 496->613|PF00378|2e-06|31.2|109/170|ECH| HM:PFM:NREP 3 HM:PFM:REP 8->191|PF02737|3.6e-49|36.0|175/180|3HCDH_N| HM:PFM:REP 194->293|PF00725|1.4e-14|31.6|95/97|3HCDH| HM:PFM:REP 501->635|PF00378|6.1e-15|33.9|124/170|ECH| GO:PFM:NREP 8 GO:PFM GO:0006631|"GO:fatty acid metabolic process"|PF02737|IPR006176| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02737|IPR006176| GO:PFM GO:0006631|"GO:fatty acid metabolic process"|PF00725|IPR006108| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00725|IPR006108| GO:PFM GO:0006631|"GO:fatty acid metabolic process"|PF00725|IPR006108| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00725|IPR006108| GO:PFM GO:0003824|"GO:catalytic activity"|PF00378|IPR001753| GO:PFM GO:0008152|"GO:metabolic process"|PF00378|IPR001753| RP:SCP:NREP 4 RP:SCP:REP 8->181|1dliA2|3e-16|15.2|165/196|c.2.1.6| RP:SCP:REP 194->295|1f0yA1|2e-22|26.5|98/99|a.100.1.3| RP:SCP:REP 311->412|1qqgA2|2e-13|21.3|89/104|b.55.1.2| RP:SCP:REP 479->805|1wdkA4|1e-19|16.5|285/310|c.14.1.3| HM:SCP:REP 3->192|1f0yA2|4e-44|41.2|177/0|c.2.1.6|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 192->332|1wdkA1|2.1e-20|35.2|125/125|a.100.1.3|1/2|6-phosphogluconate dehydrogenase C-terminal domain-like| HM:SCP:REP 342->466|1wdkA1|1.6e-19|22.8|123/125|a.100.1.3|2/2|6-phosphogluconate dehydrogenase C-terminal domain-like| HM:SCP:REP 492->807|1wdkA4|3e-32|27.6|286/0|c.14.1.3|1/1|ClpP/crotonase| OP:NHOMO 2014 OP:NHOMOORG 751 OP:PATTERN 11-1--3544544433-111121A42211-2411---------------------------2321-11 233381-4--123253333-3222363333332323367A234421221311323334--447-4448872-----11-1--4-----------11---3-232242232--------------------------11111---311--1-------------------1-------------32222---3222222222222232222422322223443321------431111111111111111---1-------1----------1-------1111---------------------------------------2-1122111111111211222111-1-314112-651416-14---1--1-4-16332-----336552223332334443343444-22522524643-322223322233442222373343234--------3---1332---1-111-----1---21--11-1----12261-4873766566633444665544444496D49562255355555655673113----23-------1118442845-----------44414-21-33235412---------------------------22-321224322222222222223222223--122--------3222-222223233232-222222232222222222333422322222222222222222251222222--211111111111---2111113333-2422-----------1---44424333325-55544553354573111111111111-222222222222222222222223------11111111--------1---------------------------------------- ----114-42--2221232412232221111111111222122111-1233323112113331--------------------------1-121113222222222-45475532342322243322427L3-444223132252-332-33152233546827332425-5B422211H1112245742323343214 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 744 STR:RPRED 92.1 SQ:SECSTR cEEEccHEEEEEcccHHHHHHHHHHHHTTccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccccHHHHHHHHHHHHHHHHHHTcccHHHHHHHGGGcccTTTccTTHHHHccEEEEEEEETTGGEEEEEEEEcccccccccTTccccccccccTTTTccccEEEEEcccccEEEETTccGGccTTHHHHEEccGGGGTTEEEcccTTcEEHHTTHHEEcTTcEEEEEEEEccTTcEEccTTccTTTccEEccHHHHHHHHHHHHHHTcTTcccccccccccccHHHHccccHHHHHHHHHHHHHHHHHHHHETTEEEEcccccTTTTTTTTTHHHHHHHTTcccccTTccccTTGGGcccGEEEEEEcTTccEEEEEEEEEEEcccTTccccHTcHHHHHHHHHHHHHHHHHTcTTHHHHHHHTTccHcHHHHHHHHccTTccEEEcTTccccccGGGGGGcccTccccEEEEEEcGGGcEEEEEEccGTTcccHHHHHHHHHHHHHHHHcTTccEEEEcE##EEEEccccEccccEEEccccHHHHTTccHHHHHHTTTTTTTTGGGGccccEEEEEccEEETHHHHHHHHccEEEEETTcEEEccGGGGTccccccHHHHGGGTcc##############cHHHHHHHHHHccEEEHHHHHHHTc###ccEEEccHHHHHHHHHHHHHHHHHccHHH##############HHHHHHH#############################HHHHHHccHHHHHHHHHHHHHHHTccHHHHHHHHHHHTTccGG## DISOP:02AL 1-4,60-68,647-647,806-809| PSIPRED cccccEEEEEEEcccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccccHHHHccccEEEEEccccHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHcccccEEEEEccccHHHcEEEEEEccccccHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHccccccccccccEEccccccccccccccccccccccHHHHHHHHHHHHHHccccccEEcccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccHHHHHHHccHHHHHHHHHHHHHHccccccccccHHHHHHHHcccccEEccccccccccccEEccccccccccccHHHHHHHHHHccHHHHHHHHccccccEEEEEEcccEEEEEEcccccccccHHHHHHHHHHHHHHHccccEEEEEEcccEEEccccccEEEHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccEEEEcHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccHHHHHHccccccccEEEEccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccc //