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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07303.1
DDBJ      :             tyrosyl-tRNA synthetase
Swiss-Prot:SYY_RALEJ    RecName: Full=Tyrosyl-tRNA synthetase;         EC=6.1.1.1;AltName: Full=Tyrosine--tRNA ligase;         Short=TyrRS;

Homologs  Archaea  32/68 : Bacteria  905/915 : Eukaryota  163/199 : Viruses  0/175   --->[See Alignment]
c.26.1d.66.1
:413 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->413 1h3eA PDBj 2e-95 48.6 %
:RPS:PDB   16->332 2akeA PDBj 2e-61 14.6 %
:RPS:PDB   354->409 2cqjA PDBj 4e-05 19.6 %
:RPS:SCOP  23->327 1jiiA  c.26.1.1 * e-103 28.2 %
:RPS:SCOP  316->410 1jh3A  d.66.1.4 * 3e-11 23.6 %
:HMM:SCOP  17->333 1jilA_ c.26.1.1 * 1.7e-86 40.6 %
:HMM:SCOP  336->414 1h3fA2 d.66.1.4 * 6.4e-20 41.8 %
:RPS:PFM   51->329 PF00579 * tRNA-synt_1b 3e-37 39.7 %
:HMM:PFM   51->331 PF00579 * tRNA-synt_1b 3.9e-75 36.2 276/292  
:HMM:PFM   355->396 PF01479 * S4 2.7e-10 40.5 42/48  
:BLT:SWISS 1->413 SYY_RALEJ 0.0 92.5 %
:PROS 60->70|PS00178|AA_TRNA_LIGASE_I

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07303.1 GT:GENE ABF07303.1 GT:PRODUCT tyrosyl-tRNA synthetase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 442941..444182 GB:FROM 442941 GB:TO 444182 GB:DIRECTION + GB:PRODUCT tyrosyl-tRNA synthetase GB:PROTEIN_ID ABF07303.1 GB:DB_XREF GI:93353214 InterPro:IPR000253 InterPro:IPR001412 InterPro:IPR002305 InterPro:IPR002307 InterPro:IPR002942 LENGTH 413 SQ:AASEQ MSEVSPAAAANYPLTPSVMRALEITKRGCDELLVESEWLQKLARSEATGVPLRIKLGLDPTAPDIHLGHTVVLNKLRQLQDLGHQVIFLIGDFTSTIGDPSGRNSTRPPLTREQIEANAQTYYRQASLVLDPARTEIRYNSEWCDPLGARGMIQLAAKYTVARMMERDDFTKRFRSGIPISVHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQKEYGQESQCILTMPLLVGLDGVEKMSKSKNNYIGVTEAPNDMFGKLMSISDELMWQYYTLLSFRPMSEIDLMKSEVALGRNPRDCKVALAQEIVTRFHSQADAEKALEDFNHRARGGVPDDIPAVSLEGAPLGIAQLLKQANLVPSTSEANRNIEQGGVKIDGAVVSDKSTKVVAGTYVVQVGKRRFARVTLS GT:EXON 1|1-413:0| SW:ID SYY_RALEJ SW:DE RecName: Full=Tyrosyl-tRNA synthetase; EC=6.1.1.1;AltName: Full=Tyrosine--tRNA ligase; Short=TyrRS; SW:GN Name=tyrS; OrderedLocusNames=Reut_A0476; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis; RNA-binding. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->413|SYY_RALEJ|0.0|92.5|413/413| GO:SWS:NREP 7 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| PROS 60->70|PS00178|AA_TRNA_LIGASE_I|PDOC00161| BL:PDB:NREP 1 BL:PDB:REP 21->413|1h3eA|2e-95|48.6|389/427| RP:PDB:NREP 2 RP:PDB:REP 16->332|2akeA|2e-61|14.6|302/373| RP:PDB:REP 354->409|2cqjA|4e-05|19.6|56/71| RP:PFM:NREP 1 RP:PFM:REP 51->329|PF00579|3e-37|39.7|267/279|tRNA-synt_1b| HM:PFM:NREP 2 HM:PFM:REP 51->331|PF00579|3.9e-75|36.2|276/292|tRNA-synt_1b| HM:PFM:REP 355->396|PF01479|2.7e-10|40.5|42/48|S4| GO:PFM:NREP 6 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00579|IPR002305| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00579|IPR002305| GO:PFM GO:0005524|"GO:ATP binding"|PF00579|IPR002305| GO:PFM GO:0005737|"GO:cytoplasm"|PF00579|IPR002305| GO:PFM GO:0006412|"GO:translation"|PF00579|IPR002305| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00579|IPR002305| RP:SCP:NREP 2 RP:SCP:REP 23->327|1jiiA|e-103|28.2|298/319|c.26.1.1| RP:SCP:REP 316->410|1jh3A|3e-11|23.6|89/99|d.66.1.4| HM:SCP:REP 17->333|1jilA_|1.7e-86|40.6|310/323|c.26.1.1|1/1|Nucleotidylyl transferase| HM:SCP:REP 336->414|1h3fA2|6.4e-20|41.8|79/0|d.66.1.4|1/1|Alpha-L RNA-binding motif| OP:NHOMO 1193 OP:NHOMOORG 1100 OP:PATTERN ------1------11---1-1--11111-11-1-111111111-1111111111-------------- 1111111111111111111-11111111111111111111111111211111111111111111111111111111111111111111111111111111121112111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122222222122222211221222211121111111111111111111111111111111212111111111111111111111111111111111111111111111111111111111111221111111122222222222211221111211111111122111111111111111111111111111111111111111111111111111-111111111111111111121111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112211111112111111111111111111111-111111111111111111111111-111-1111111111111111111111122211111111111111111111111111-111111111111111111111111111111111111111-11111111111111111222211111111111111111111111111122222221221111111-11111111111111111111111111111111-11111111111111111111111111111111 ----111--------11-11111111111111111111-21111--1111111111111111111111-111111-11-111111111-11-1111111111-111-1-1211111-11--11111---141-11111111111-111--1114-11111211111-111611211111A1111111121111111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 398 STR:RPRED 96.4 SQ:SECSTR ###############HHTccccHHHHTTcEEEETEEEcHHHHHHHHHTTccEEEEEEEccccccccHHHHHHHHHHHHHHHHHTccEEEEcHHHHEcHHHHGGcHHHccccHHHHHHHHHHHHHHHTTTccTTcEEEEEHHHHHTTccHHHHHHHHHHHHHHHTccHHHHHHHHcccTTccHHHHTHHHHHHGGGcGGGcHEEEEEGGGHHHHHHHHHHHHHTTccccEEEEEcccccTTcccccTTcGGGcccTTccHHHHHHHHHHHTTTcHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHTccHHHHHcHHHHccHHHHHHHHHHHHccTTTTTTTTTcccccHHHHHHHHTTcEEETTEEcccTTccccTTEEEEEcccTTccHHEEc DISOP:02AL 1-5,7-8,171-176,237-251| PSIPRED cccccccccccccccccHHHHHHHHHccccEEcccHHHHHHHHHHccccccEEEEEccccccccccHHHHHHHHHHHHHHHcccEEEEEEEcHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcHHHcccccHHHHHHHHccccHHHHHccHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccEEEccccHHHHHHHHHcccHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccccccEEcccccccHHHHHHHcccccccHHHHHHHHcccEEEccEEcccccccccccEEEEEEccEEEEEEEEc //