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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07312.1
DDBJ      :             Holliday junction endonuclease RuvC
Swiss-Prot:RUVC_RALME   RecName: Full=Crossover junction endodeoxyribonuclease ruvC;         EC=3.1.22.4;AltName: Full=Holliday junction nuclease ruvC;AltName: Full=Holliday junction resolvase ruvC;

Homologs  Archaea  2/68 : Bacteria  703/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.55.3
:181 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->130 1hjrA PDBj 1e-32 54.3 %
:RPS:SCOP  3->152 1hjrA  c.55.3.6 * 4e-31 53.0 %
:HMM:SCOP  1->159 1hjrA_ c.55.3.6 * 2.4e-52 53.2 %
:RPS:PFM   3->150 PF02075 * RuvC 5e-45 60.8 %
:HMM:PFM   3->150 PF02075 * RuvC 3.8e-54 49.3 148/149  
:BLT:SWISS 1->181 RUVC_RALME 4e-92 100.0 %
:PROS 113->147|PS01321|RUVC
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07312.1 GT:GENE ABF07312.1 GT:PRODUCT Holliday junction endonuclease RuvC GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(450724..451269) GB:FROM 450724 GB:TO 451269 GB:DIRECTION - GB:PRODUCT Holliday junction endonuclease RuvC GB:PROTEIN_ID ABF07312.1 GB:DB_XREF GI:93353223 InterPro:IPR002176 LENGTH 181 SQ:AASEQ MRILGIDPGLRTTGFGVLEKHGNKLAYVASGTIRSNGETSLPERLKTLYDGISEVARTYAPDCAAIEKVFVNVNPQSTLLLGQARGAAICGLVGQGLPVFEYTALQLKVAVVGYGRANKEQVQEMVMRLLSLSGRPSSDAADALGVAICHANGGDTLGTLAGLAPELARKGMRVRRGRLVG GT:EXON 1|1-181:0| SW:ID RUVC_RALME SW:DE RecName: Full=Crossover junction endodeoxyribonuclease ruvC; EC=3.1.22.4;AltName: Full=Holliday junction nuclease ruvC;AltName: Full=Holliday junction resolvase ruvC; SW:GN Name=ruvC; OrderedLocusNames=Rmet_0426; SW:KW Complete proteome; DNA damage; DNA recombination; DNA repair;Hydrolase; Magnesium; Metal-binding; Nuclease. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->181|RUVC_RALME|4e-92|100.0|181/181| GO:SWS:NREP 6 GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006310|"GO:DNA recombination"|DNA recombination| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0004518|"GO:nuclease activity"|Nuclease| PROS 113->147|PS01321|RUVC|PDOC01025| SEG 153->164|ggdtlgtlagla| BL:PDB:NREP 1 BL:PDB:REP 3->130|1hjrA|1e-32|54.3|127/158| RP:PFM:NREP 1 RP:PFM:REP 3->150|PF02075|5e-45|60.8|148/149|RuvC| HM:PFM:NREP 1 HM:PFM:REP 3->150|PF02075|3.8e-54|49.3|148/149|RuvC| GO:PFM:NREP 3 GO:PFM GO:0004520|"GO:endodeoxyribonuclease activity"|PF02075|IPR002176| GO:PFM GO:0006281|"GO:DNA repair"|PF02075|IPR002176| GO:PFM GO:0006310|"GO:DNA recombination"|PF02075|IPR002176| RP:SCP:NREP 1 RP:SCP:REP 3->152|1hjrA|4e-31|53.0|149/158|c.55.3.6| HM:SCP:REP 1->159|1hjrA_|2.4e-52|53.2|158/158|c.55.3.6|1/1|Ribonuclease H-like| OP:NHOMO 710 OP:NHOMOORG 708 OP:PATTERN -------------------------------------------1---1-------------------- 1111111111111111111-111111111111111111-11111111111111111-1111-111111111111111111111--111111111111--1111111111111111111111111111111111111111111111111-1--11111111111-1111111111111111111111111111---------------------------------------11------------------------------------------------------------------------------------------111------------11--------1111--1111111111111111-11111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111------11111111111111111-11111111111111111111111111111111111111111111111111111111111111111--11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111--11111111-------111--------------------------1111111111111 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------1--------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 127 STR:RPRED 70.2 SQ:SECSTR ##EEEEEccccEEEEEEEEEETTEEEEEEEEEEEcccc#cHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccTTTHHHHHHHHHHHHHHHHTTTccEEEEEHHHHHHHHTccccccHHHHHHHHHHHT################################################### PSIPRED cEEEEEcccccEEEEEEEEEEccEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHccccEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHccccEEEEcHHHEEEEEEEcccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccccccc //