[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07395.1
DDBJ      :             transmembrane pair
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  162/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:153 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   2->61 PF05232 * BTP 5e-08 48.3 %
:RPS:PFM   77->134 PF05232 * BTP 6e-10 43.1 %
:HMM:PFM   2->66 PF05232 * BTP 2.4e-26 44.6 65/68  
:HMM:PFM   72->134 PF05232 * BTP 2.4e-28 44.4 63/68  
:TM
:REPEAT 2|2->59|72->133

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07395.1 GT:GENE ABF07395.1 GT:PRODUCT transmembrane pair GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(540515..540976) GB:FROM 540515 GB:TO 540976 GB:DIRECTION - GB:PRODUCT transmembrane pair GB:PROTEIN_ID ABF07395.1 GB:DB_XREF GI:93353306 InterPro:IPR007896 LENGTH 153 SQ:AASEQ MRTTADRIRHTVGFELIGLLIFAPLASLVFGYALHQMGLVGAVASLIAAVWNYVYNILFDRGMLRFTGQLRKTPAIRVLHAILFEGGLLLVFLPSVAWYLDMTLLDAFIMDIAVAGFYMVYALVYNWVYDAVFPIPGLKAKEDSQPADCPSAN GT:EXON 1|1-153:0| TM:NTM 3 TM:REGION 11->33| TM:REGION 75->97| TM:REGION 110->132| NREPEAT 1 REPEAT 2|2->59|72->133| RP:PFM:NREP 2 RP:PFM:REP 2->61|PF05232|5e-08|48.3|60/67|BTP| RP:PFM:REP 77->134|PF05232|6e-10|43.1|58/67|BTP| HM:PFM:NREP 2 HM:PFM:REP 2->66|PF05232|2.4e-26|44.6|65/68|BTP| HM:PFM:REP 72->134|PF05232|2.4e-28|44.4|63/68|BTP| OP:NHOMO 212 OP:NHOMOORG 162 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-11-11-11-----11-------11-------1-----1-11111111-11-1---------------------------------------111-233332-111122--22221231-1111--111--111111-1111--1--------------1------1--1--111----------------------------------------------11----1--2---111-121---2-21-21-------------1--1-11------------------------------11111--11--1111111-111112---------111111111111------------------1112-1---------21222211-1-12222222-13333-1-11----1----1222-----11211------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2,138-154| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHcccccccccccc //