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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07401.1
DDBJ      :             two component transcriptional regulator, winged helix family
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  849/915 : Eukaryota  35/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:244 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   26->231 2oqrA PDBj 4e-32 34.5 %
:RPS:PDB   25->232 3c3wB PDBj 3e-23 18.5 %
:RPS:SCOP  25->118 1p2fA2  c.23.1.1 * 2e-21 36.3 %
:RPS:SCOP  139->236 1oddA  a.4.6.1 * 4e-22 48.0 %
:HMM:SCOP  1->135 1k66A_ c.23.1.1 * 4.5e-39 47.4 %
:HMM:SCOP  130->236 1ys7A1 a.4.6.1 * 2.6e-24 37.7 %
:RPS:PFM   30->118 PF00072 * Response_reg 1e-16 51.7 %
:RPS:PFM   157->231 PF00486 * Trans_reg_C 4e-11 44.0 %
:HMM:PFM   9->119 PF00072 * Response_reg 8.5e-31 39.6 111/112  
:HMM:PFM   157->233 PF00486 * Trans_reg_C 9.8e-24 39.0 77/77  
:BLT:SWISS 25->236 OMPR_SHIFL 2e-51 47.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07401.1 GT:GENE ABF07401.1 GT:PRODUCT two component transcriptional regulator, winged helix family GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 551784..552518 GB:FROM 551784 GB:TO 552518 GB:DIRECTION + GB:PRODUCT two component transcriptional regulator, winged helix family GB:PROTEIN_ID ABF07401.1 GB:DB_XREF GI:93353312 InterPro:IPR001789 InterPro:IPR001867 LENGTH 244 SQ:AASEQ MRTNQPTQILVVDDDPELRDLLREYLTSQGFAVSVLHDGDGLQARLERERPALIVLDLMMPKVDGLTALRNLRAKNDDIPVILLTARSDEIDRIVGLEIGADDYLGKPFSPRELLARINAVLRRKLARPAAAPEDRESVVFGPFRVNFRQRSLERSGQSVSISDTEFALLKLLLSHPLEVLSRERIVELMYGTANGISDRGIDVQIWRLRRLLDEDAQRPRYIQTVRGRGYTFVPDEAEDSIPQ GT:EXON 1|1-244:0| BL:SWS:NREP 1 BL:SWS:REP 25->236|OMPR_SHIFL|2e-51|47.6|212/239| SEG 10->24|lvvdddpelrdllre| SEG 120->133|avlrrklarpaaap| BL:PDB:NREP 1 BL:PDB:REP 26->231|2oqrA|4e-32|34.5|203/226| RP:PDB:NREP 1 RP:PDB:REP 25->232|3c3wB|3e-23|18.5|189/210| RP:PFM:NREP 2 RP:PFM:REP 30->118|PF00072|1e-16|51.7|89/111|Response_reg| RP:PFM:REP 157->231|PF00486|4e-11|44.0|75/77|Trans_reg_C| HM:PFM:NREP 2 HM:PFM:REP 9->119|PF00072|8.5e-31|39.6|111/112|Response_reg| HM:PFM:REP 157->233|PF00486|9.8e-24|39.0|77/77|Trans_reg_C| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 25->118|1p2fA2|2e-21|36.3|91/120|c.23.1.1| RP:SCP:REP 139->236|1oddA|4e-22|48.0|98/100|a.4.6.1| HM:SCP:REP 1->135|1k66A_|4.5e-39|47.4|135/149|c.23.1.1|1/1|CheY-like| HM:SCP:REP 130->236|1ys7A1|2.6e-24|37.7|106/0|a.4.6.1|1/1|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 10632 OP:NHOMOORG 895 OP:PATTERN -----------------------------1-----1--1---11--16-5111--------------- 6HK6N466778445A9999-9E448A999997GCDD9EECC9CE87676776BBC45711HFL6N6FPKM6333344457HA713466DEPL-F22---54F468L5L8H--------------131332224283PMMPOH8DT5fSZWQPDGECD967B99MKFEdfoH684565675545BB666341B6GVVWVWUUWHWTXXVSFHDBBCVWd9BCU8FCA99A9AeX7AA9A99899AAA9979996B675CC655466677CC655675686CDC866879977777787777555556666665575666465675RKLbPPPTSUUSQKEZVV9DFBRKF8BCGM84aVH99545647686227DA8EFFA66666FDPMKD9DEJFHK9989999988D-IKIIKMKOBM91RIILLGJRRLGGEM8C9D9HHBGGACBBBBBBBBBBABAAMGB2211211122332333323223223222236BF56CCB9GRTWUZQLIIIEPPUVKIKJCJVSTKPMV12JNNOEMGEZLNOP7HPK999AC81211111984HNa7GE963958GD76E1JKGHEFHB9ECADIS69C8575444444232322222BH59HAAKHAEHHM8GEEJEJJGBIGMLLJMKIJKMM--34958------EGDFBGAEFFFEFFGEE-FGFEEEEEEGFEEEEEEEDJIJCF889FDFFFFFFEFFEFEFFHDCDDDEE81CEEEEEEEEEEE--2C3333356558CWBN444333244443125DCABD7C89AMDXUXXSYXaNTVWVLNNQ3212132125CFFNEEEEEHIOKLQRHFJFGGGG8878--M14455661-------2-2-------------------------48433555454I3 ----11--------3---------------------------------------------------111-11---111111111----------1-222--1------2-------------------------------------------------2----2-1-------4-111-------3--B---21C---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 241 STR:RPRED 98.8 SQ:SECSTR cTTGGGccEEEEcccHHHHHHHHHHHHTcTTEEEEEEEccHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGGGccHHHHHHHHHHHHHHHHHcHHHHHHHHHcTTTTccHHHHHHHHHHTTTccHHHHHHHcHHHHHcTTHTccHHHHHHHHHHHHHHTcTcccccHHHHHHHHHTcccTTTTHHHH### DISOP:02AL 1-3,128-137,236-245| PSIPRED cccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHccccccEEEEEccccHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHHcccccccccccEEEEccEEEEcccEEEEEccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHccccccccccEEHHHHHHHHHHcccccccccEEEEEcccEEEEccccccccccc //