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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07463.1
DDBJ      :             nucleoside 2-deoxyribosyltransferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  55/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
c.23.14
:173 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->142 2a0kA PDBj 5e-11 40.2 %
:RPS:PDB   4->142 3ehdA PDBj 4e-26 21.1 %
:RPS:SCOP  2->152 2a0kA1  c.23.14.1 * 7e-41 36.8 %
:HMM:SCOP  1->166 2f62A1 c.23.14.1 * 3.9e-45 47.0 %
:RPS:PFM   4->106 PF05014 * Nuc_deoxyrib_tr 4e-19 51.0 %
:HMM:PFM   4->142 PF05014 * Nuc_deoxyrib_tr 4.2e-39 52.2 113/113  
:BLT:SWISS 4->152 YQ65_SCHPO 7e-14 35.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07463.1 GT:GENE ABF07463.1 GT:PRODUCT nucleoside 2-deoxyribosyltransferase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 619011..619532 GB:FROM 619011 GB:TO 619532 GB:DIRECTION + GB:PRODUCT nucleoside 2-deoxyribosyltransferase GB:PROTEIN_ID ABF07463.1 GB:DB_XREF GI:93353374 InterPro:IPR007710 LENGTH 173 SQ:AASEQ MKMVYLAGFDVFREDARDWGEQLKALCMRYGYEGLYPLDKAAPSGLSGSATAQWIYEANIALIRRADVVMANLDDFRGSGEPDSGTAFEVGFAVALEKPVWGYAADAGTLLDRVRVRTDADGNARDARGYVVEDFGLSMNLMLACSVRRVTGDAEACLAAMAEADRQLAVRRD GT:EXON 1|1-173:0| BL:SWS:NREP 1 BL:SWS:REP 4->152|YQ65_SCHPO|7e-14|35.6|149/211| SEG 154->164|aeaclaamaea| BL:PDB:NREP 1 BL:PDB:REP 2->142|2a0kA|5e-11|40.2|122/151| RP:PDB:NREP 1 RP:PDB:REP 4->142|3ehdA|4e-26|21.1|133/156| RP:PFM:NREP 1 RP:PFM:REP 4->106|PF05014|4e-19|51.0|98/119|Nuc_deoxyrib_tr| HM:PFM:NREP 1 HM:PFM:REP 4->142|PF05014|4.2e-39|52.2|113/113|Nuc_deoxyrib_tr| GO:PFM:NREP 2 GO:PFM GO:0005634|"GO:nucleus"|PF05014|IPR007710| GO:PFM GO:0070694|"GO:deoxyribonucleoside 5'-monophosphate N-glycosidase activity"|PF05014|IPR007710| RP:SCP:NREP 1 RP:SCP:REP 2->152|2a0kA1|7e-41|36.8|136/152|c.23.14.1| HM:SCP:REP 1->166|2f62A1|3.9e-45|47.0|151/0|c.23.14.1|1/1|N-(deoxy)ribosyltransferase-like| OP:NHOMO 66 OP:NHOMOORG 60 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11------11111---111-1------------------------111111-111--11---------------------21111111-----------------------------------111-1------------------------1111--111---------1--------------------1-1---------------------------------------------------------1-----1--------------------------------------------------------------------------------------------------------------------------------------------------------------------1-2222-1--------111------------------------------------------------------------------------------------------------- --------111---------------------------------------------------------------------------11--------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 152 STR:RPRED 87.9 SQ:SECSTR #cEEEEEcGccccHHHHHHHHHHHHHHTcTTEEEEcGGGGccccccTTccccHHHHHHHHHHHHTccEEEEEcccccccccccHHHHHHHHHHHHTTccEEEEcccGGGHHHHHHTTcTTccccccccHHHHHHHHTTEEEEHHHTEEEEcHH#################### DISOP:02AL 170-174| PSIPRED ccEEEEEccccccHHHHHHHHHHHHHHHHccccEEEccccccccccccHHHHHHHHHHHHHHHHHccEEEEEEccccccccccccHHHHHHHHHHccccEEEEEcccHHHHHHcccccccccccccccccEEcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccc //