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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07489.1
DDBJ      :             putative integral membrane sensor protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  19/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.110.3d.243.1
:429 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   294->416 3c2wD PDBj 8e-06 9.9 %
:RPS:SCOP  334->428 1tfoA1  d.243.1.1 * 2e-07 8.9 %
:HMM:SCOP  311->428 1p97A_ d.110.3.7 * 6e-08 24.8 %
:HMM:PFM   12->294 PF05231 * MASE1 2.2e-32 26.5 283/299  
:HMM:PFM   329->412 PF08447 * PAS_3 3.9e-11 22.6 84/91  
:BLT:SWISS 325->413 NODV_BRAJA 5e-04 27.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07489.1 GT:GENE ABF07489.1 GT:PRODUCT putative integral membrane sensor protein GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 651978..653267 GB:FROM 651978 GB:TO 653267 GB:DIRECTION + GB:PRODUCT putative integral membrane sensor protein GB:PROTEIN_ID ABF07489.1 GB:DB_XREF GI:93353400 InterPro:IPR007895 LENGTH 429 SQ:AASEQ MNLTNRAVTLPLWAILYFVLGYFSHKFNGPFTAAGYIWLPAGVTVAAFMLAPMRRWLGLGLAFLVAQMLLGMVEGRDAFRMLLFSLDEIGFAALAVAVIHLTKFSLEGLAFLRGLLLAGVIASVGGAVIGAGWFWLFLDVPFWATAKVWAAADFVGVLIVTPVFAGWARFRAARSGGRQPGEFFFGLAALACVLATAALVFDGTRIAQLSLGVAYALTYIPLFFVAIVALLLGGRGGSVAVALLTVLVLVNTAQGDGPFAETALYHGDSLLIAQLYLAVAALLTLLINTLRTAREQTNAQAAARQNDVELALAASGQLVYRLDPHSGRLRWSGSVERALGLHDSALSTLDDVLARVHPDDRAEVRRRWLRECDGETRGDLTFRLLLPAGATTTIVDMSGPLLDGDDSVALIAGAWRVIASHDTEGRRAA GT:EXON 1|1-429:0| BL:SWS:NREP 1 BL:SWS:REP 325->413|NODV_BRAJA|5e-04|27.0|89/100| TM:NTM 10 TM:REGION 6->28| TM:REGION 30->52| TM:REGION 56->78| TM:REGION 80->102| TM:REGION 114->136| TM:REGION 148->169| TM:REGION 181->203| TM:REGION 208->230| TM:REGION 238->260| TM:REGION 270->292| SEG 106->132|leglaflrglllagviasvggavigag| SEG 187->199|laalacvlataal| SEG 239->253|vavalltvlvlvnta| SEG 270->293|lliaqlylavaalltllintlrta| RP:PDB:NREP 1 RP:PDB:REP 294->416|3c2wD|8e-06|9.9|111/478| HM:PFM:NREP 2 HM:PFM:REP 12->294|PF05231|2.2e-32|26.5|283/299|MASE1| HM:PFM:REP 329->412|PF08447|3.9e-11|22.6|84/91|PAS_3| RP:SCP:NREP 1 RP:SCP:REP 334->428|1tfoA1|2e-07|8.9|90/103|d.243.1.1| HM:SCP:REP 311->428|1p97A_|6e-08|24.8|113/0|d.110.3.7|1/1|PYP-like sensor domain (PAS domain)| OP:NHOMO 19 OP:NHOMOORG 19 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1111-11111----1111--1-----1--111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 123 STR:RPRED 28.7 SQ:SECSTR #####################################################################################################################################################################################################################################################################################################ccTTTGGGccccccHcccEEcTTcEEEEEcTTccEEEEEccHHHHcccHHHHHHcccTTccccHHHHHHHHHHHHccHHHcccEEEEEEEETTEEEEEEEEEETTEEEEEEEEcccccccTTT############# DISOP:02AL 1-4,297-304,423-423,427-430| PSIPRED ccccccEEHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcHHHHcccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccEEEEcHHHHHHHcccccccccHHHHHHHccccHHHHHHHHHHHHHHccccEEEEEEEEcccccEEEEEEEEEEEEcccccEEEEEEEEEEccHHHHHHHHcc //