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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07493.1
DDBJ      :             hydroxymethylglutaryl-CoA lyase
Swiss-Prot:             

Homologs  Archaea  19/68 : Bacteria  293/915 : Eukaryota  156/199 : Viruses  0/175   --->[See Alignment]
c.1.10
:310 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->295 2cw6A PDBj 4e-87 55.1 %
:RPS:PDB   2->295 2cw6A PDBj 4e-51 52.4 %
:RPS:SCOP  2->292 1sr9A2  c.1.10.5 * 8e-50 14.8 %
:HMM:SCOP  1->304 1rqbA2 c.1.10.5 * 4.2e-72 32.1 %
:RPS:PFM   15->261 PF00682 * HMGL-like 4e-19 31.2 %
:HMM:PFM   15->263 PF00682 * HMGL-like 1.8e-54 33.5 236/237  
:BLT:SWISS 2->295 HMGCL_RAT 2e-93 55.1 %
:PROS 233->242|PS01062|HMG_COA_LYASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07493.1 GT:GENE ABF07493.1 GT:PRODUCT hydroxymethylglutaryl-CoA lyase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(658789..659721) GB:FROM 658789 GB:TO 659721 GB:DIRECTION - GB:PRODUCT hydroxymethylglutaryl-CoA lyase GB:PROTEIN_ID ABF07493.1 GB:DB_XREF GI:93353404 InterPro:IPR000138 InterPro:IPR000891 LENGTH 310 SQ:AASEQ MTIPQYVKIVEVGPRDGLQNEKAMVPTDVKVALINRLTDAGFVNIEAASFVSPKWVPQMADGADVMARITRRPGTLYSVLTPNMKGFEGAVAAGADEVVIFGAASEAFSQKNINCSIAESIARFEPVAAAAKEAGVRLRGSISCALGCPYQGEVSVHAVVDVVRRLRELGCDEIDIADTIGVGTPTRVQEVMRAAAAEFSIDRLSGHFHDTYGQALSNILASLEVGIAIFHASVAGLGGCPYAKGATGNVATEDVLYMLHGMGLHTGIELDDVVRAGDFISQAIGRANSSRVGRALLTKWASQAGEASCA GT:EXON 1|1-310:0| BL:SWS:NREP 1 BL:SWS:REP 2->295|HMGCL_RAT|2e-93|55.1|294/325| PROS 233->242|PS01062|HMG_COA_LYASE|PDOC00813| SEG 88->99|egavaagadevv| SEG 154->163|vsvhavvdvv| BL:PDB:NREP 1 BL:PDB:REP 2->295|2cw6A|4e-87|55.1|294/296| RP:PDB:NREP 1 RP:PDB:REP 2->295|2cw6A|4e-51|52.4|294/296| RP:PFM:NREP 1 RP:PFM:REP 15->261|PF00682|4e-19|31.2|234/237|HMGL-like| HM:PFM:NREP 1 HM:PFM:REP 15->263|PF00682|1.8e-54|33.5|236/237|HMGL-like| GO:PFM:NREP 1 GO:PFM GO:0003824|"GO:catalytic activity"|PF00682|IPR000891| RP:SCP:NREP 1 RP:SCP:REP 2->292|1sr9A2|8e-50|14.8|283/310|c.1.10.5| HM:SCP:REP 1->304|1rqbA2|4.2e-72|32.1|280/303|c.1.10.5|1/1|Aldolase| OP:NHOMO 728 OP:NHOMOORG 468 OP:PATTERN ------11111111-1--212221-----11------------1--------------------1--- 11-11---------111----1--12-----1111112231--2---1----11------111-113111------------1----------------1-111111111--------------------------33332---11----------------------------------------11---11111111111111111111111111111112--------1---------------------------------------------------------------------------------------------1-------------1------------------------------------1111-------311---1111111-11111-11---3--2-1----1111--1---11111211221111111--------1----111-------------------------------11--144344333341----22331111113123562-123141233445253111----11----------111122----------------1----111111-----------------------------11-11-1121-1111111111111111111---1-------------2---------------------------------------------------------------------------------1111111111111-1---------------22112-11112111111122121322111-------------1-----12-211111111111--------11-111------------------------------------------------- ----111---1-121221132222123112111111111111111111211122111111111--------------------------15121111111121112-1112232314222212142252CK3-647222232221222222122232221111211211172111111-----1133351311-2111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 309 STR:RPRED 99.7 SQ:SECSTR HccccccEEEEcTTTHHHHTccccccHHHHHHHHHHHHHTTccEEccEEcccTTTcGGGTTHHHHHHHccccTTccccEEcccHHHHHHHHHTTccEEEEEEEccHHHHHHHHcccHHHHHHHHHHHHHHHHHTTcEEEEEEETTTccTTTccccHHHHHHHHHHHHHTTccEEEEEETTccccHHHHHHHHHHHHHHccGGGEEEEEccTTccHHHHHHHHHHTTccEEEEcTTcccccTTcccccccccHHHHHHHHHHHTccccccHHHHHHHHHHHHHHTTcccccHHHHHTTcccccccccccH# DISOP:02AL 1-3,305-311| PSIPRED cccccEEEEEEcccccccccccccccHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccHHHHcccccEEEEEEccHHHHHHHHcccHHHHHHHHHHHHHHHHHcccEEEEEEEEEEccccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHccccEEEEEEEccccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccc //