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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07498.1
DDBJ      :             two component transcriptional regulator, LuxR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  705/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:231 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   38->220 3c3wB PDBj 2e-15 29.6 %
:RPS:PDB   13->231 3c3wA PDBj 4e-30 31.7 %
:RPS:SCOP  13->130 1p2fA2  c.23.1.1 * 4e-18 21.4 %
:RPS:SCOP  169->230 1a04A1  a.4.6.2 * 1e-15 32.3 %
:HMM:SCOP  10->204 1s8nA_ c.23.1.1 * 5.2e-25 26.6 %
:RPS:PFM   13->126 PF00072 * Response_reg 2e-13 35.1 %
:RPS:PFM   170->221 PF00196 * GerE 4e-09 48.1 %
:HMM:PFM   168->222 PF00196 * GerE 5.5e-21 41.8 55/58  
:HMM:PFM   13->123 PF00072 * Response_reg 9.8e-21 33.9 109/112  
:BLT:SWISS 62->231 DEGU_BREBE 4e-22 35.1 %
:PROS 184->211|PS00622|HTH_LUXR_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07498.1 GT:GENE ABF07498.1 GT:PRODUCT two component transcriptional regulator, LuxR family GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 666464..667159 GB:FROM 666464 GB:TO 667159 GB:DIRECTION + GB:PRODUCT two component transcriptional regulator, LuxR family GB:PROTEIN_ID ABF07498.1 GB:DB_XREF GI:93353409 InterPro:IPR000792 InterPro:IPR001789 InterPro:IPR007050 LENGTH 231 SQ:AASEQ MPDTAESVLPAPLLVVEDEPPMQSRLRTILAALGYGDDAIWFAGSLEAANTLLATQPFAMALVDVGLPDGNGIDLIRVMHEQDPALPILVISTWNTERVIVSALQAGATGYLLKERDDVEIILSIRSALRGGAPIDPFVARRILDLAGKMAPLAGGAEVQAGPTVGAPPLSAREIEILSLVSKGLTNREIAEVLSLSKLTVECHIRNSYKKLAVHSRTQAVFEARASGLLR GT:EXON 1|1-231:0| BL:SWS:NREP 1 BL:SWS:REP 62->231|DEGU_BREBE|4e-22|35.1|168/236| PROS 184->211|PS00622|HTH_LUXR_1|PDOC00542| BL:PDB:NREP 1 BL:PDB:REP 38->220|3c3wB|2e-15|29.6|169/210| RP:PDB:NREP 1 RP:PDB:REP 13->231|3c3wA|4e-30|31.7|208/211| RP:PFM:NREP 2 RP:PFM:REP 13->126|PF00072|2e-13|35.1|111/111|Response_reg| RP:PFM:REP 170->221|PF00196|4e-09|48.1|52/57|GerE| HM:PFM:NREP 2 HM:PFM:REP 168->222|PF00196|5.5e-21|41.8|55/58|GerE| HM:PFM:REP 13->123|PF00072|9.8e-21|33.9|109/112|Response_reg| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0003700|"GO:transcription factor activity"|PF00196|IPR000792| GO:PFM GO:0005622|"GO:intracellular"|PF00196|IPR000792| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00196|IPR000792| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00196|IPR000792| RP:SCP:NREP 2 RP:SCP:REP 13->130|1p2fA2|4e-18|21.4|112/120|c.23.1.1| RP:SCP:REP 169->230|1a04A1|1e-15|32.3|62/67|a.4.6.2| HM:SCP:REP 10->204|1s8nA_|5.2e-25|26.6|188/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 3501 OP:NHOMOORG 710 OP:PATTERN -------------------------------------------------------------------- ADD3Z8574433-264422-27--5B222223B777DHHG6A7LBF653874666345--78E5VCJTbVA2222834-3418----111-1-111---6-5123G3E331---------1111--------1---BCCEE577I7B48A8853212-2-223564BDAF111-1111111-157522--27465555568747556788877586871336522222222FB333333333333333333321---33-1--1221233221-1-11112211-133322222222222-------------3111111112172721111221-1-11111---6-1--B111-73212125-21111---7211113-1-1-13H681246766833333333335-76577A75495-44463365557825113413746634522222222-3211653------------------------------2252-63123A99BA886664998H88883B8A9BDIE--9B78B76688BED27A27946741111111113958129121A2-53335-3-762472498787644--111------------------113356255225421478774458AA47748568---1525------62353545776565665-7566667666766555558354445436566666666566666455555561-666666566666--2223222111122A2211111211111-11233223231-124CBIB8E8CB66757EC9-----1----2337566665554588AAAA86571111-11-442222--------2---------------------------1---------3I2 ------------------------------------------------------------------------------------------------------------2----------------------------------------------------------------2-----------2--2-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 231 STR:RPRED 100.0 SQ:SECSTR ccccTEEEcHHHEEEEcccHHHHHHHHHHHHTcTTEEEEEEEccHHHHHHHHHHHccccEEEEccEETTEEHHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGGGccHHHHEEGGTTHHHHHHHHHHHHHccTTTTTTTTccHHHHHHHHHHHTTccHHHHHHHHTccHHHHHHHHHHHHHHTTcccccHHHHHHHHHTTTc DISOP:02AL 1-11,152-168| PSIPRED ccccccccccEEEEEEccHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHccccEEEEccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccHHHHccccccHHcccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHccccc //