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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07512.1
DDBJ      :             Rhs element Vgr protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  166/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
b.106.1b.108.1b.40.8
:889 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   48->464 2p5zX PDBj 7e-33 35.6 %
:RPS:PDB   48->372 3d37A PDBj 4e-49 7.3 %
:RPS:SCOP  48->208 2p5zX2  b.106.1.1 * 2e-33 27.4 %
:RPS:SCOP  274->369 2p5zX3  b.106.1.1 * 2e-20 29.2 %
:RPS:SCOP  378->463 2p5zX1  b.40.8.1 * 2e-14 42.4 %
:RPS:SCOP  458->665 1k28A2  b.108.1.2 * 1e-17 9.4 %
:RPS:PFM   124->208 PF05954 * Phage_GPD 8e-09 39.7 %
:RPS:PFM   397->473 PF04717 * Phage_base_V 1e-06 38.2 %
:RPS:PFM   635->756 PF10106 * DUF2345 5e-28 51.6 %
:HMM:PFM   605->757 PF10106 * DUF2345 2.5e-51 47.7 153/156  
:HMM:PFM   401->477 PF04717 * Phage_base_V 4.7e-14 29.0 69/79  
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07512.1 GT:GENE ABF07512.1 GT:PRODUCT Rhs element Vgr protein GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 686770..689439 GB:FROM 686770 GB:TO 689439 GB:DIRECTION + GB:PRODUCT Rhs element Vgr protein GB:PROTEIN_ID ABF07512.1 GB:DB_XREF GI:93353423 InterPro:IPR006533 LENGTH 889 SQ:AASEQ MAGELDGLKAYGAEALRNAVAVTVTGRQAYFLEVPGSASAAGLSVVSFEAVERLGEPYEVRVRLTHPLELGRAEYLNRDATFVIDAGEDSEPRKFAGWVSGFSKTRQTRDFCAYEMVVVPQVARLRLTKRSRIYQQKTAPQIIEAILRGHELKGHQFAFKTRRTYPQLAFRMQYEMSDWDYIRLLMEQEGLYCYFTPGKFGEMVVFGDDIDHYIYQPELRVPYRETAGLESGLEAVYEIQTHAITVPASVKVADYNSADSWERKVAEANIAYKDKTTYGQPYVYGTHHLDQAGAKWQAQLRHEAAIAWQLTYAGQSNVLALRPARILRIDTTLPDAPNGQVITEVIHTGARDQAYRNTYKAIPCDRRFRLPMDESKWPRIAGALSGRITSPGQYKYAYLTQDGHYIVRFDFDFDEWPKGGESVPLRLAKPFAGALQTGFHFPLIDGTEVAIAFHDGNPNKPFISAALHASLQPDHITNQDRWMSRNVFRTQANNKLRFEDWQGQESVKLSTEYGGKTQLNLGYLVDHKKKKRGEGFELRTSGWGAIRGGKGLFLSADDQPGANGQHLDMQSALWLLEQALQQSEALADTAKAAQAMAADCERQKTLLNASLKQLKAASLLASAPAGMALVSGTDLQLSAANNMIATAGGNADISVLRQFAVAAGNGISLFVQKLGIKLFAAKGKVEIQAQSDELNLTALKDLKVISVDGKLILSAKTEVWIGVGGSYIRITPERIENGTPGDIYEKCAAWDKKGAASMQVSTALNSGLPKQLLMLNTAASPASSNTLPAGMPYKLLAGGAVVKQGVMDGTGFIPVDHLPTTQAYQLELANGAKYTLPVADDYRGDAANGELANQGIHFHEAAHGSDGAAADRAAHRRAYHETFNPESEA GT:EXON 1|1-889:0| COIL:NAA 29 COIL:NSEG 1 COIL:REGION 575->603| SEG 36->47|gsasaaglsvvs| SEG 570->598|qsalwlleqalqqsealadtakaaqamaa| SEG 606->629|llnaslkqlkaasllasapagmal| SEG 861->878|aahgsdgaaadraahrra| BL:PDB:NREP 1 BL:PDB:REP 48->464|2p5zX|7e-33|35.6|334/361| RP:PDB:NREP 1 RP:PDB:REP 48->372|3d37A|4e-49|7.3|313/326| RP:PFM:NREP 3 RP:PFM:REP 124->208|PF05954|8e-09|39.7|78/285|Phage_GPD| RP:PFM:REP 397->473|PF04717|1e-06|38.2|76/88|Phage_base_V| RP:PFM:REP 635->756|PF10106|5e-28|51.6|122/154|DUF2345| HM:PFM:NREP 2 HM:PFM:REP 605->757|PF10106|2.5e-51|47.7|153/156|DUF2345| HM:PFM:REP 401->477|PF04717|4.7e-14|29.0|69/79|Phage_base_V| RP:SCP:NREP 4 RP:SCP:REP 48->208|2p5zX2|2e-33|27.4|157/177|b.106.1.1| RP:SCP:REP 274->369|2p5zX3|2e-20|29.2|96/113|b.106.1.1| RP:SCP:REP 378->463|2p5zX1|2e-14|42.4|66/71|b.40.8.1| RP:SCP:REP 458->665|1k28A2|1e-17|9.4|202/217|b.108.1.2| OP:NHOMO 623 OP:NHOMOORG 167 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1-----------1-------------------------------1-----1-2-------------11-11------------------------------------------------------1---3E57547F555575578889-87722452--4161-B--1---6--------6------------11----------1----1---11-2-----2H-----------------------------313-5-----2------1-----------1--------------8-5112-332-33342-32-3--22-433----1--33352A7--81121-1111111113---1113---88778846885---------------233----3----------3343224---2-9A58A393433-3-633----------223-3333312-11--1-1--233--------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 397 STR:RPRED 44.7 SQ:SECSTR ###############################################EEEccccEEEEEEEcccccEEEEEEcccccTTcEEEEEETTTTTEEEEEEEEEEEEEEEETTEEEEEEEEEETHHHHHHcccccccccTccHHHHHHHHHTTcTTccccEEEEcccccccccccccTTccHHHHHHHHHHHTTcEEEEcTTcTccEEEEcccTTcccccccEEEEEccccTTccccEEEEEEccTTcTcccEEEEEEccccccEEEEEEcTTccccccEEEEccccHHHHHHHHHHHHHHHHHHHTEEEEEEEEccccTTcccccTTcEEEEEETTTTEEEEEEEEEEEEEEETTTEEEEEEEEEETTcccTTcccccccccccccEEEEEccc###ccccccTTccEEEEcccc#ccccTTccEEEEcc################ccccEEEEEEGGGcTTcEEEE######################################################################################################################################################################################################################################################################################################################################################################################################################################### DISOP:02AL 1-5,258-277,472-493,559-559,562-564,636-636,751-766,884-884,886-890| PSIPRED cccccHHHHHHcHHccHHHHHHHHHccccEEEEEccccccccEEEEEEEEEEcccccEEEEEEEEccccccHHHHcccEEEEEEEEcccccEEEEEEEEEEEEEEcccccEEEEEEEEEcHHHHHHcccccEEEEcccHHHHHHHHHHHccccccEEEEEEccccccccEEEcccccHHHHHHHHHHHcccEEEEEEcccccEEEEEcccHHccccccccEEEEccccccccHHHHHHHEEEEEEEccEEEEEEcccccccccccccccccccccccccccEEcccccccHHHHHHHHHHHHHHHHHccEEEEEEEcccccccccEEEEccccHHHcccEEEEEEEEEcccccEEEEEEEEEEccccccccccccccccccccEEEEEEccccccEEEEcccccEEEEEcccccccccccccEEEEEEEccccccccEEEEccccccEEEEEEEcccccccEEEEEEEccccccccccccccEEEEEEccccccEEEEEEccccEEEEEEEEcccEEEEEccEEEccccccccccEEEEEcccEEEEcccEEEEEEcccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccEEEEccccEEEEEccEEEEEcccccEEEEccEEEEEEccEEEEEEEcccEEEEEccccEEEEEEcccEEEEEcccEEEEEEccEEEEEcccEEEEEccccEEEEEcccEEEEcccEEEEEEccccccccccccccccccccccccEEEEEccccccccccccccccEEEEccccEEEEEEEcccccEEEccccEEEEEEEEEcccEEEEEEcccccccccccHHHHHcccccccccccccccHHHHHHHHHHHHHHccccccc //