[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07534.1
DDBJ      :             Flp pilus assembly CpaB
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  150/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.85.1
:281 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   42->100 1c89A PDBj 2e-08 14.3 %
:RPS:SCOP  42->100 1vliA1  b.85.1.1 * 3e-10 5.1 %
:HMM:PFM   38->97 PF08666 * SAF 1.1e-13 28.8 59/63  
:HMM:PFM   118->187 PF09739 * DUF2044 0.00098 20.0 70/527  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07534.1 GT:GENE ABF07534.1 GT:PRODUCT Flp pilus assembly CpaB GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(715009..715854) GB:FROM 715009 GB:TO 715854 GB:DIRECTION - GB:PRODUCT Flp pilus assembly CpaB GB:PROTEIN_ID ABF07534.1 GB:DB_XREF GI:93353445 InterPro:IPR010728 LENGTH 281 SQ:AASEQ MKNTRAILMLLIALVAGAAAVVSASRWLLQQSSSSVKQVVVAANDLDLGQPLNGSQLKLVSWPAGSVPPGAFEDPKTLDGRVVRTSLQRGEPIIDAKLAPVGTKGGLSAVINDGKRAITVRVNDVVGVAGFALPGNYVDVIVNTNEDTKSAQNGSISKIVLEKILVLAVAQQVSRDDTQPKVVNAVTLEVSPDQAEKLDVARSVGTLSLVLRNQMDVADINTGGATKHTLLGKAELPAPAPLAAPAPVTRTVVKTRTVAAAPRAGNCVGVLAGIQGSLECF GT:EXON 1|1-281:0| TM:NTM 1 TM:REGION 4->26| SEG 6->25|ailmllialvagaaavvsas| SEG 30->41|qqssssvkqvvv| SEG 237->264|papaplaapapvtrtvvktrtvaaapra| RP:PDB:NREP 1 RP:PDB:REP 42->100|1c89A|2e-08|14.3|56/134| HM:PFM:NREP 2 HM:PFM:REP 38->97|PF08666|1.1e-13|28.8|59/63|SAF| HM:PFM:REP 118->187|PF09739|0.00098|20.0|70/527|DUF2044| RP:SCP:NREP 1 RP:SCP:REP 42->100|1vliA1|3e-10|5.1|59/72|b.85.1.1| OP:NHOMO 199 OP:NHOMOORG 150 OP:PATTERN -------------------------------------------------------------------- 1-3--------------------------------------------------------------------------------------------------------------------------11----121-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------11--1-----------11112------132311111111----------1-111112112311111121311222--12111-1111111--------111--1--------------------------------1211--21213112131-11111212222133212232--221-------1121----11------------11------11-1-1-111-2-1----111111--11--------------------------------------1------1----1-11-11-----------------------------------------------------1---------------------------------------------------------------------------------------1111----------------------1---1------1122------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 59 STR:RPRED 21.0 SQ:SECSTR #########################################EcccccccccccTTTcEEEEccccccccGGHccHHHHTTccccccccccEEccTTTccc##################################################################################################################################################################################### DISOP:02AL 1-3,145-157,170-182| PSIPRED cccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHEEEEEccHHHccccccccHHHHcccEEEccccccccccHHHcccccccccHHHHcccccEEEEEEcccccccccccccccEEEEEEEEcccccccccccEEEEEEcccEEEEEcccccHHHccccccEEEEEEEcHHHHHHHHHHHHccEEEEEEEcccccccccccccccccccccccccccccccccccccEEEEEEEEEccccccccHHHHccccccccccc //