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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07587.1
DDBJ      :             extracellular solute-binding protein, family 3
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  455/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:302 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   32->300 2vhaA PDBj 1e-94 62.1 %
:RPS:PDB   32->270 2a5sA PDBj 6e-39 15.9 %
:RPS:SCOP  33->276 1xt8A1  c.94.1.1 * 5e-41 22.1 %
:HMM:SCOP  12->275 2a5sA1 c.94.1.1 * 1e-59 32.9 %
:RPS:PFM   54->272 PF00497 * SBP_bac_3 3e-19 30.6 %
:HMM:PFM   45->271 PF00497 * SBP_bac_3 2e-47 30.4 217/225  
:BLT:SWISS 37->300 GLTI_ECOLI 2e-93 62.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07587.1 GT:GENE ABF07587.1 GT:PRODUCT extracellular solute-binding protein, family 3 GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 773842..774750 GB:FROM 773842 GB:TO 774750 GB:DIRECTION + GB:PRODUCT extracellular solute-binding protein, family 3 GB:PROTEIN_ID ABF07587.1 GB:DB_XREF GI:93353498 InterPro:IPR001311 InterPro:IPR001638 LENGTH 302 SQ:AASEQ MKSLSVRPTPVTRLLAAAALLCAAAGAHAADGDTLKKIKDSGVISLGYRESSIPFSYSDGKEVMGYSHDYLLAIVDKVKSTLNMPNLQVKLTPITSQNRIPLMQNGTIDIECGSTTNNLERQKQVAFSNSLFIYGIRMLTKKDSGVTDFPQLKDKNVVTTAGTTGERLLVKMNGEGMNMNLTSAKDHGQAFLILESGRAAAFVMDEPLLYGERTKAKNAAEWVVAGKPLQTENYACMFRKDDPSFKKLVDGVVADIMTSGRGEKLYAKWFQSPIPPRNINMNYPLSPDMKQLFAEPNDKAFQ GT:EXON 1|1-302:0| BL:SWS:NREP 1 BL:SWS:REP 37->300|GLTI_ECOLI|2e-93|62.5|264/302| SEG 14->30|llaaaallcaaagahaa| BL:PDB:NREP 1 BL:PDB:REP 32->300|2vhaA|1e-94|62.1|269/276| RP:PDB:NREP 1 RP:PDB:REP 32->270|2a5sA|6e-39|15.9|239/278| RP:PFM:NREP 1 RP:PFM:REP 54->272|PF00497|3e-19|30.6|209/222|SBP_bac_3| HM:PFM:NREP 1 HM:PFM:REP 45->271|PF00497|2e-47|30.4|217/225|SBP_bac_3| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00497|IPR001638| GO:PFM GO:0006810|"GO:transport"|PF00497|IPR001638| GO:PFM GO:0030288|"GO:outer membrane-bounded periplasmic space"|PF00497|IPR001638| RP:SCP:NREP 1 RP:SCP:REP 33->276|1xt8A1|5e-41|22.1|235/248|c.94.1.1| HM:SCP:REP 12->275|2a5sA1|1e-59|32.9|255/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 1159 OP:NHOMOORG 464 OP:PATTERN -----------------------1-------11------111-------------------------- -----11-------1------1---1------11111123-212111-------1--1--1---3312-2-11111112-2----------------------------------------------------------1------3454445-----------4--332--------------11--11--121222223312222221---1222221-----11111111---1-1111111-11-----13142141333223311111231---111211112233353433334-------------122233222111233111-11-1112233-111-1-1-1--1-22-3-1----1111-11-------31111--6411112111111221222227-1151161721--8564221-232674-----4----1-1---------11--1-2-----------------------------1------43426776861344433695666365673747-1A98216227161A6116----2111--------11---5-44251163341-----2----------2-1-14111111------1----2----111-------2--------------------------------44662552333333333-33433333333333323335545622222123233323333235323433311455555554555--2------------112111--1---------33323-11111-54451353211221444--------------11111----------------------3------------------------------------------1---11-111--- --------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------1-----------------4---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 272 STR:RPRED 90.1 SQ:SECSTR ##############################ccccccccTTcEEEEEEEEcccccccEEEEEEEEcHHHHHHHHHHHcEEEEEccccccccEETTEEcHHHHHHHTTcccEEcccccccHHHHTTEEEccccEEEcEEEEEETTcccccTTcHHHccEEccTTcHHHHHHHTTcHHHHHHGGGccccHHHHHHHHHTTcccEEEEEHHHHHHHHHTcTTccEEEEEcccGGGcEEEccEEETTcTTHHHHHHHHHHHHHHTHHHHHHHHHTTTTcccccEEEEHHHHHHcHHHHHHHHHHHHH DISOP:02AL 1-6,299-303| PSIPRED cccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccEEEEEEcccccEEEEEccEEEEEEHHHHHHHHHHHHHHHcccccEEEEEEccHHHHHHHHHcccEEEEEccccccHHHHHHHHHcccEEEccEEEEEEcccccccHHHHcccEEEEEcccHHHHHHHHHHHHccccEEEEEccHHHHHHHHHccccEEEEEcHHHHHHHHHHccccccEEEcccccccccEEEEEEcccHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccccccccHHHHHHHccccccccc //