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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07627.1
DDBJ      :             transcriptional regulator, AsnC family
Swiss-Prot:             

Homologs  Archaea  33/68 : Bacteria  505/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
a.4.5d.58.4
:169 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->160 2gqqC PDBj 5e-46 54.5 %
:RPS:PDB   11->160 2e1cA PDBj 1e-24 28.1 %
:RPS:SCOP  11->70 1i1gA1  a.4.5.32 * 9e-18 40.0 %
:RPS:SCOP  73->158 2cg4A2  d.58.4.2 * 7e-19 17.9 %
:HMM:SCOP  9->71 2cg4A1 a.4.5.32 * 2.7e-20 55.6 %
:HMM:SCOP  71->160 1ri7A2 d.58.4.2 * 1.9e-19 36.0 %
:RPS:PFM   15->56 PF08279 * HTH_11 1e-04 54.8 %
:RPS:PFM   90->150 PF01037 * AsnC_trans_reg 6e-10 36.1 %
:HMM:PFM   77->151 PF01037 * AsnC_trans_reg 1.2e-22 36.5 74/74  
:HMM:PFM   18->57 PF01047 * MarR 7.4e-05 35.0 40/59  
:BLT:SWISS 3->160 LRP_SHIFL 5e-46 53.2 %
:PROS 29->55|PS00519|HTH_ASNC_1
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07627.1 GT:GENE ABF07627.1 GT:PRODUCT transcriptional regulator, AsnC family GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 819951..820460 GB:FROM 819951 GB:TO 820460 GB:DIRECTION + GB:PRODUCT transcriptional regulator, AsnC family GB:PROTEIN_ID ABF07627.1 GB:DB_XREF GI:93353538 InterPro:IPR000485 LENGTH 169 SQ:AASEQ MRTSRQPVRALDRLDRKILGVLQADGRISMKELAEAVGLTITPCIERVKRLERDGVIMGYYARLNPTLLGSALLVFVEISLGNKSGNMFEQFRREVLRIPEVLECHLVSGDFDYLIKARIREIGEYRRLLGDILLQLPGAAQSKSYVVMEEIKETLAIAVDEKERSQPG GT:EXON 1|1-169:0| BL:SWS:NREP 1 BL:SWS:REP 3->160|LRP_SHIFL|5e-46|53.2|158/164| PROS 29->55|PS00519|HTH_ASNC_1|PDOC00520| TM:NTM 1 TM:REGION 63->85| BL:PDB:NREP 1 BL:PDB:REP 7->160|2gqqC|5e-46|54.5|154/157| RP:PDB:NREP 1 RP:PDB:REP 11->160|2e1cA|1e-24|28.1|146/147| RP:PFM:NREP 2 RP:PFM:REP 15->56|PF08279|1e-04|54.8|42/52|HTH_11| RP:PFM:REP 90->150|PF01037|6e-10|36.1|61/74|AsnC_trans_reg| HM:PFM:NREP 2 HM:PFM:REP 77->151|PF01037|1.2e-22|36.5|74/74|AsnC_trans_reg| HM:PFM:REP 18->57|PF01047|7.4e-05|35.0|40/59|MarR| GO:PFM:NREP 4 GO:PFM GO:0003700|"GO:transcription factor activity"|PF01037|IPR019887| GO:PFM GO:0005622|"GO:intracellular"|PF01037|IPR019887| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01037|IPR019887| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF01037|IPR019887| RP:SCP:NREP 2 RP:SCP:REP 11->70|1i1gA1|9e-18|40.0|60/60|a.4.5.32| RP:SCP:REP 73->158|2cg4A2|7e-19|17.9|84/86|d.58.4.2| HM:SCP:REP 9->71|2cg4A1|2.7e-20|55.6|63/0|a.4.5.32|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 71->160|1ri7A2|1.9e-19|36.0|86/0|d.58.4.2|1/1|Dimeric alpha+beta barrel| OP:NHOMO 2468 OP:NHOMOORG 544 OP:PATTERN ------11222222232111111-111---1---------------1---1---5663455---2-21 -21-A---222---4--23-23--32222223212125761211611--22-666232--8851636997-1----------------333314111--21624353616---------------11111111111--------11---1----------------1----------------422-------14444444234343352311-3343---3111------23-----------------1-----1--11---1111----------------------------------------------------------13---1-11-1-1211----1-1---121-221--------------2--B886111-142A6A222544737777777777A-11611A156I2-ICCDGGSIHJED836436AF7A678GH2222222246631178------------------------------15G65CCBACOLMMPNGDCCBGHGFGGGGAFIKH89BA-177C38A788692C3332----622222212---141--1-212--12----2-1----------11---------------------------11344321628624344313422224344222--1----------23562232222222222-2222222222222222222546353333234333343243444722222221-433333333333---2-----2222-163D222241122221221AB999751213288989D7E5AC9939AA---------133454344397B764322222222------------------------------------------------------------1-- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----2------1--1--------------4-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 167 STR:RPRED 98.8 SQ:SECSTR HHHHTccHHHccHHHHHHHHHHHHcTTccHHHHHHHHTccHHHHHHHHHHHHHTTccccccccccGGGGTccEEEEEEEEEcTcHHTcHHHHHHHHHTcTTEEEEEEccccccEEEEEEEccHHHHHHHHHHHHHHcTTEEEEEEEEcccccccccccccHHHHHHT## DISOP:02AL 1-12,159-170| PSIPRED cccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHccccccEEEEEcHHHcccccEEEEEEEEccccHHHHHHHHHHHHccccEEEEEEEEccccEEEEEEEccHHHHHHHHHHHHHccccccEEEEEEEEEEEccccccccccccccccc //