[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07628.1
DDBJ      :             Radical SAM
Swiss-Prot:             

Homologs  Archaea  43/68 : Bacteria  278/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.154.1d.350.1
:361 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   74->210 3bz6A PDBj 2e-04 11.3 %
:RPS:PDB   184->361 2dqxA PDBj 9e-23 12.4 %
:RPS:SCOP  73->192 2h7aA1  d.350.1.1 * 1e-06 6.7 %
:HMM:SCOP  165->284 1b65A_ d.154.1.1 * 5.6e-11 33.0 %
:HMM:PFM   74->252 PF04055 * Radical_SAM 1.9e-18 23.6 161/166  
:BLT:SWISS 68->286 Y2609_MYCBO 3e-33 34.2 %
:BLT:SWISS 270->309 BUB1_MOUSE 6e-04 37.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07628.1 GT:GENE ABF07628.1 GT:PRODUCT Radical SAM GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(820480..821565) GB:FROM 820480 GB:TO 821565 GB:DIRECTION - GB:PRODUCT Radical SAM GB:PROTEIN_ID ABF07628.1 GB:DB_XREF GI:93353539 InterPro:IPR002787 InterPro:IPR006638 InterPro:IPR007197 LENGTH 361 SQ:AASEQ MTSLPDGFRKGRGALSNTESRFDSLSREADAAMLADLEALHGESPAPRTTIAIEPARTIISRNQSPDVPFDQSINMYRGCEHGCSYCFARPNHAYLGLSPGLDFETKLFAKPNAATLLEQELRKKHYKPSVIALGTNTDPYQPIERKFQLTRGILEVLERFQHPVAITTKSFLVSRDIDILARMARNGLARVFMSVTTLDADIARKMEPRASTPAKRIEGIRLLAEAGVPAGVLFAPVIPALTDYDLENVLKACSEVGATSAGFVMLRLPLEVHGIFIEWLEEHFPGRKQHVLSIIENMRNGKHNDATFTSRMRGTGIFAELVRKRFEIACRRLGLNQERHPLRTDLFRVPPEDSPQGSLF GT:EXON 1|1-361:0| BL:SWS:NREP 2 BL:SWS:REP 68->286|Y2609_MYCBO|3e-33|34.2|219/340| BL:SWS:REP 270->309|BUB1_MOUSE|6e-04|37.5|40/1058| SEG 28->40|eadaamladleal| RP:PDB:NREP 2 RP:PDB:REP 74->210|3bz6A|2e-04|11.3|124/164| RP:PDB:REP 184->361|2dqxA|9e-23|12.4|161/491| HM:PFM:NREP 1 HM:PFM:REP 74->252|PF04055|1.9e-18|23.6|161/166|Radical_SAM| RP:SCP:NREP 1 RP:SCP:REP 73->192|2h7aA1|1e-06|6.7|104/109|d.350.1.1| HM:SCP:REP 165->284|1b65A_|5.6e-11|33.0|115/367|d.154.1.1|1/1|DmpA/ArgJ-like| OP:NHOMO 358 OP:NHOMOORG 321 OP:PATTERN 222122111111121221222323---2----11--1--------1--1-111-231222211-4--- 111-1---------11111-11--111111111111111111-1-11--1-1111-11---1----1111----------1-1--------1-------1---11111-1--------------------------11111---1---2---------------1-----1-----------------1112------------------1----------1----------1----------------------------------------------------1----------------------------------------111111111-2-12------1-----11-111--1----2---1---1--1111-----111111111111111111111111-11111111111-11111111111111111-111111-11--------111-1-1-------------------------------1111-111111111111111111111111111111111--111111111-1-1---1-1-1-----------1-11-------1-1-------------111-111-----------------------------112---------------------------------1---------------------------------------------------------------------------------------------1-111----11111--------------------------111211111111111111------------------------1111111111-------1----11--------2----------------------------1---11111121 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 320 STR:RPRED 88.6 SQ:SECSTR #########################################GGGcccTTccccHHHHHHHHHHHccEEEEEEEEEEEcccccccTTcTTTcTTccccccccccHHHHHEEcHHHHHHHHHHHHHTTccEEEEEEcccGGccHHHHHHHHGTTHHHHHHHHHHHTTccEEEEEcccccHHHHHHHHHHHTTTcEEEEccTTccGGGccGGGTccHHHHHHHHHHHHHTTccEEEEEEcccccccHHHHHHHHHHHcTTcccTTccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHTTTccccccGGGGTcccccccTTTcccccccHHHHTTTccTTcGGGGccccccccccccccc DISOP:02AL 1-5,8-8,355-357| PSIPRED cccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccEEEEEEccccHHcccccccccccEEEccccccccccEEEEcccccHHHcccccccccccccccccHHHHHHHHHHccccccEEEEEcccccccccccccccHHHHHHHHHHHccccEEEEEcccHHHccHHHHHHHHHccccEEEEEEccccHHHHHHHccccccHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHccccEEEEEEEEccccccHHHHHHHHHHcHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccHHHcccccccccccccc //