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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07667.1
DDBJ      :             Iojap-related protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  708/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
d.218.1
:256 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->113 2id1A PDBj 6e-19 44.1 %
:RPS:SCOP  10->119 2id1A1  d.218.1.12 * 7e-38 48.2 %
:RPS:PFM   14->112 PF02410 * DUF143 4e-18 43.4 %
:HMM:PFM   16->112 PF02410 * DUF143 1.1e-31 44.3 97/100  
:HMM:PFM   169->252 PF01034 * Syndecan 1.6e-05 23.1 78/328  
:BLT:SWISS 9->112 YBEB_SHIFL 5e-16 33.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07667.1 GT:GENE ABF07667.1 GT:PRODUCT Iojap-related protein GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(857513..858283) GB:FROM 857513 GB:TO 858283 GB:DIRECTION - GB:PRODUCT Iojap-related protein GB:PROTEIN_ID ABF07667.1 GB:DB_XREF GI:93353578 InterPro:IPR004394 LENGTH 256 SQ:AASEQ MKLNKKDTMDIRKLQRAIVDGLEDVKAQDIKVFDTTHLTELFDRVVIASGNSNRQTKALAASVRDTVKDAGGHIVAVEGLETGEWVLVDCGDAVVHILQPQLRLYYNLEEIWGDKPVRVKLAAGKGLAKASEPMDDEDAEPAPRVRRASNLRPALARLPEGMKEPSPPMGHEDTDPDAIATIRKPARKTSSTGTAAKAPARKTTTARKTTTGTAAKTPARKSATGTATKTTARKTTATKTAAAKTAAPRKRATRSA GT:EXON 1|1-256:0| BL:SWS:NREP 1 BL:SWS:REP 9->112|YBEB_SHIFL|5e-16|33.7|104/105| SEG 120->130|klaagkglaka| SEG 192->255|tgtaakaparktttarktttgtaaktparksatgtatkttarkttatktaaaktaaprkratrs| BL:PDB:NREP 1 BL:PDB:REP 10->113|2id1A|6e-19|44.1|102/117| RP:PFM:NREP 1 RP:PFM:REP 14->112|PF02410|4e-18|43.4|99/99|DUF143| HM:PFM:NREP 2 HM:PFM:REP 16->112|PF02410|1.1e-31|44.3|97/100|DUF143| HM:PFM:REP 169->252|PF01034|1.6e-05|23.1|78/328|Syndecan| RP:SCP:NREP 1 RP:SCP:REP 10->119|2id1A1|7e-38|48.2|110/120|d.218.1.12| OP:NHOMO 721 OP:NHOMOORG 716 OP:PATTERN -------------------------------------------------------------------- -1111-------11-------1--11-----1-1111111---1----111111-1------1--1-111-11111111111-1111-1111-1-----111111111-11111111111111111111111111111111111-1111-11111111111111111111111-1--11-1111----11-11111111111111111111111111111111111111111111111111111111111111--1111111-111--1111-111---1111111111111111111111111111111111-111111111111-------------1------1-11-1111111111111-111111-11211111111-1111111111111111111111111-11111111111-11111111111111111111111111111111111-1111-1111111111-1--1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111-11-----------------11-1---111111111111111111111111111111--11111------11----11--1111-11-1121111111111111111111--11111111111111111111-1---1-1-11111111111111-11111111111111-1111111111111111111111111111111111111111111111111111111111111111111111--------11111-1---1111------------------------------------1-1-------111 --------------1-----------------------------------------------------------------------------------------------2---------------------------------------------------------------------1-1--1221---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 104 STR:RPRED 40.6 SQ:SECSTR #########cHHHHHHHHHHHHHHTTcEEEEEEEGGGTcccccEEEEEEcccHHHHHHHHHHHHHHHHHTTccccccccTTTccEEEEEEETTEEEEEcHHHHHHHcHHHHTT############################################################################################################################################### DISOP:02AL 1-11,75-76,128-155,157-171,183-204,207-229,239-257| PSIPRED ccccccccccHHHHHHHHHHHHHHcccccEEEEEcccccccccEEEEEEEccHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEcccEEEccccHHHHHHHHHHHHHccccEEEEEEcccccccccccccHHHHccccHHHccccccHHHHHccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccHHHHHccc //