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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07676.1
DDBJ      :             protein of unknown function DUF6, transmembrane
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  152/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.39.1
:532 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   452->528 2aelB PDBj 3e-05 13.7 %
:RPS:SCOP  281->382 1s7bA  f.39.1.1 * 3e-10 8.9 %
:RPS:SCOP  457->528 1s7bA  f.39.1.1 * 8e-06 18.1 %
:HMM:SCOP  279->382 1s7bA_ f.39.1.1 * 1.3e-10 24.0 %
:HMM:SCOP  426->532 1s7bA_ f.39.1.1 * 1.4e-11 28.7 %
:RPS:PFM   261->379 PF00892 * EamA 2e-08 27.1 %
:RPS:PFM   404->527 PF00892 * EamA 5e-06 27.2 %
:HMM:PFM   256->379 PF00892 * EamA 1.6e-16 22.8 123/126  
:HMM:PFM   403->529 PF00892 * EamA 4.5e-17 29.6 125/126  
:BLT:SWISS 256->529 YCBK_BACSU 9e-25 30.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07676.1 GT:GENE ABF07676.1 GT:PRODUCT protein of unknown function DUF6, transmembrane GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 865611..867209 GB:FROM 865611 GB:TO 867209 GB:DIRECTION + GB:PRODUCT protein of unknown function DUF6, transmembrane GB:PROTEIN_ID ABF07676.1 GB:DB_XREF GI:93353587 InterPro:IPR000620 InterPro:IPR004853 LENGTH 532 SQ:AASEQ MSLRIGNQFRNGFHRQALAHLQHDGRGAEQADRREVAPRIERHVLVDMRVEGVGRDRAEADRVAVGRCLGHGIHADVATGARPVLNDDRLAELFGHALAHGAGYEVGGAACGVGHDEADRLAREAVGGKGGRRHGEREQGSGQDGTAARREAVGRHDSGISSFLLFLRGARLWRAAQAPAIVWESRHWRGPGEHCVFWHTIAGFPPRAARIERAGPAYARTASPVPASQKSLSPPVEVPAAQRVGLAVAAIGAVLFSAKAIVAKLMYRYNVDAVMVITLRMLFAVPLFMAIGWWQARKLPALSWADRGRVVFLGFIGYYLSSFLDFIGLQYITASLERLILFLTPSFVLLTTALVFRRPIAARQWISLLLAYVGIVLVFAHDLDVSGPQVWLGGALVLGSAMSYGVYLILSGELVQRVGSLRLVAYAMCVSTFCCVVQYLALGRPIAELAQPAPVMWLSVVNAVFCTVLPVSLTMIAVARIGAPMASQAGMIGPVSTLLLAFWLLGEPISGVQMIGSALVLGGMYLLSTKKA GT:EXON 1|1-532:0| BL:SWS:NREP 1 BL:SWS:REP 256->529|YCBK_BACSU|9e-25|30.6|268/312| TM:NTM 9 TM:REGION 242->264| TM:REGION 271->293| TM:REGION 309->331| TM:REGION 335->356| TM:REGION 364->386| TM:REGION 392->414| TM:REGION 420->442| TM:REGION 457->479| TM:REGION 488->510| SEG 124->142|eavggkggrrhgereqgsg| SEG 244->255|vglavaaigavl| RP:PDB:NREP 1 RP:PDB:REP 452->528|2aelB|3e-05|13.7|73/353| RP:PFM:NREP 2 RP:PFM:REP 261->379|PF00892|2e-08|27.1|118/125|EamA| RP:PFM:REP 404->527|PF00892|5e-06|27.2|121/125|EamA| HM:PFM:NREP 2 HM:PFM:REP 256->379|PF00892|1.6e-16|22.8|123/126|EamA| HM:PFM:REP 403->529|PF00892|4.5e-17|29.6|125/126|EamA| GO:PFM:NREP 2 GO:PFM GO:0016020|"GO:membrane"|PF00892|IPR000620| GO:PFM GO:0016020|"GO:membrane"|PF00892|IPR000620| RP:SCP:NREP 2 RP:SCP:REP 281->382|1s7bA|3e-10|8.9|101/106|f.39.1.1| RP:SCP:REP 457->528|1s7bA|8e-06|18.1|72/106|f.39.1.1| HM:SCP:REP 279->382|1s7bA_|1.3e-10|24.0|100/106|f.39.1.1|1/2|Multidrug resistance efflux transporter EmrE| HM:SCP:REP 426->532|1s7bA_|1.4e-11|28.7|101/106|f.39.1.1|2/2|Multidrug resistance efflux transporter EmrE| OP:NHOMO 219 OP:NHOMOORG 162 OP:PATTERN ----------------------11--------------1-11---2------1-1---11-------- --------------------------------------------------------------------------------11------11-1-211------21--1--------------------------------1----1-2--1----------------------------------------122-1111133222313331122-31232-1---1------51---------------------------------------------------------------------------------------------------------1-11-111-1---1----22-4---121--1--2---1------------11-----1-------------------------------1--1-----1---------------------------1--------------------------------1--11111111111-----11--------11-111111111111---2121112111-1---------1---211-1-1--1--2111-1-1-----------1-11-1--------------------------1---------------1---------------------------------------------------------------------------------------------------------------------------------11---------3232321---------1-11--1-------------------------1----11---------------1111111---------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 73 STR:RPRED 13.7 SQ:SECSTR ###################################################################################################################################################################################################################################################################################################################################################################################################################################################################cHHHHHHHHHHHH#HHTTcccccccHHHHHHHHHHHHHHHHHHHTcHHHHHHccccHH###HHHHHHHHHHHHHHHH#### DISOP:02AL 1-1,5-6,24-35,124-152,219-236| PSIPRED ccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHccccccccccHHcccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccEEEHHHHcccccccHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccc //