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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07704.1
DDBJ      :             glutaminyl-tRNA synthetase
Swiss-Prot:SYQ_RALME    RecName: Full=Glutaminyl-tRNA synthetase;         EC=6.1.1.18;AltName: Full=Glutamine--tRNA ligase;         Short=GlnRS;

Homologs  Archaea  68/68 : Bacteria  758/915 : Eukaryota  196/199 : Viruses  0/175   --->[See Alignment]
b.53.1c.26.1
:582 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->579 1qrsA PDBj 0.0 60.2 %
:RPS:PDB   44->392 2d5bA PDBj 5e-44 13.7 %
:RPS:PDB   370->552 3b8pB PDBj 8e-49 8.5 %
:RPS:SCOP  44->374 1g59A2  c.26.1.1 * 1e-68 24.2 %
:RPS:SCOP  368->579 1euqA1  b.53.1.2 * 1e-55 51.0 %
:HMM:SCOP  43->374 1j09A2 c.26.1.1 * 5.3e-97 43.0 %
:HMM:SCOP  368->579 1gtrA1 b.53.1.2 * 3.8e-81 57.4 %
:RPS:PFM   44->338 PF00749 * tRNA-synt_1c 5e-38 38.6 %
:RPS:PFM   368->559 PF03950 * tRNA-synt_1c_C 2e-58 64.9 %
:HMM:PFM   44->363 PF00749 * tRNA-synt_1c 7.6e-109 40.3 305/314  
:HMM:PFM   368->559 PF03950 * tRNA-synt_1c_C 2.6e-61 52.3 172/173  
:BLT:SWISS 1->582 SYQ_RALME 0.0 100.0 %
:PROS 50->61|PS00178|AA_TRNA_LIGASE_I

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07704.1 GT:GENE ABF07704.1 GT:PRODUCT glutaminyl-tRNA synthetase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(889587..891335) GB:FROM 889587 GB:TO 891335 GB:DIRECTION - GB:PRODUCT glutaminyl-tRNA synthetase GB:PROTEIN_ID ABF07704.1 GB:DB_XREF GI:93353615 InterPro:IPR000924 InterPro:IPR001412 InterPro:IPR004514 LENGTH 582 SQ:AASEQ MSHDTKPNDTPAASNFLRSIIDQDLATGTYAGRADKQGDPLPTVITRFPPEPNGYLHIGHAKSICVNFGLARDYAGRCHLRFDDTNPVKEDTEYVDSIIDAVHWLGFSWDSAQAGSTPHLYFASDYFDQLYKFAETLIERGVAYVDSQSAEQIAAMRGNFSEPGKPSPFRDRSVEENLKLFREMRDGKYADGEHVLRAKIDMTAPNIVMRDPVLYRIRHAHHHRTGDKWCIYPMYDFTHCISDAIENITHSLCTLEFENNRPLYDWVLEHLRDAGVFANPLPHQYEFARLNLTYAITSKRRLKQLVDEQRVTGWDDPRMPTIVGIRRRGYTPESIQLFCDRVGVSKADSWIDMSTLEGAVRDDLDARAPRSVAVLDPLKLILDNYPEGQSEECSAPVHPKQPEMGRRVFPLSRELWIEREDFNENPPKGYFRLFPGNKVRLRYGYVIECTGVDKDADGNVIAVHANYLPETKSGTPGADSVKVKGNIHWVSAPHACEAEVRLYDRLFNDPNPDAGGKNFLDALNPESKKVVTAYLEPGLRDAKPEDRFQFERHGYFVADRVDSQPGKPVFNRTVGLKDSWGK GT:EXON 1|1-582:0| SW:ID SYQ_RALME SW:DE RecName: Full=Glutaminyl-tRNA synthetase; EC=6.1.1.18;AltName: Full=Glutamine--tRNA ligase; Short=GlnRS; SW:GN Name=glnS; OrderedLocusNames=Rmet_0818; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->582|SYQ_RALME|0.0|100.0|582/582| GO:SWS:NREP 6 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| PROS 50->61|PS00178|AA_TRNA_LIGASE_I|PDOC00161| BL:PDB:NREP 1 BL:PDB:REP 14->579|1qrsA|0.0|60.2|528/529| RP:PDB:NREP 2 RP:PDB:REP 44->392|2d5bA|5e-44|13.7|335/500| RP:PDB:REP 370->552|3b8pB|8e-49|8.5|165/173| RP:PFM:NREP 2 RP:PFM:REP 44->338|PF00749|5e-38|38.6|277/309|tRNA-synt_1c| RP:PFM:REP 368->559|PF03950|2e-58|64.9|185/186|tRNA-synt_1c_C| HM:PFM:NREP 2 HM:PFM:REP 44->363|PF00749|7.6e-109|40.3|305/314|tRNA-synt_1c| HM:PFM:REP 368->559|PF03950|2.6e-61|52.3|172/173|tRNA-synt_1c_C| GO:PFM:NREP 12 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00749|IPR020058| GO:PFM GO:0005524|"GO:ATP binding"|PF00749|IPR020058| GO:PFM GO:0005737|"GO:cytoplasm"|PF00749|IPR020058| GO:PFM GO:0006412|"GO:translation"|PF00749|IPR020058| GO:PFM GO:0016876|"GO:ligase activity, forming aminoacyl-tRNA and related compounds"|PF00749|IPR020058| GO:PFM GO:0043039|"GO:tRNA aminoacylation"|PF00749|IPR020058| GO:PFM GO:0000166|"GO:nucleotide binding"|PF03950|IPR020059| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF03950|IPR020059| GO:PFM GO:0005524|"GO:ATP binding"|PF03950|IPR020059| GO:PFM GO:0005737|"GO:cytoplasm"|PF03950|IPR020059| GO:PFM GO:0006412|"GO:translation"|PF03950|IPR020059| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF03950|IPR020059| RP:SCP:NREP 2 RP:SCP:REP 44->374|1g59A2|1e-68|24.2|298/305|c.26.1.1| RP:SCP:REP 368->579|1euqA1|1e-55|51.0|198/198|b.53.1.2| HM:SCP:REP 43->374|1j09A2|5.3e-97|43.0|300/0|c.26.1.1|1/1|Nucleotidylyl transferase| HM:SCP:REP 368->579|1gtrA1|3.8e-81|57.4|209/209|b.53.1.2|1/1|Ribosomal protein L25-like| OP:NHOMO 1886 OP:NHOMOORG 1022 OP:PATTERN 11111111111111111111111111111111111111111111111111111111111111111111 322111111111-11------1---1-------111-11111---1111111-111111111111111111111111111112111112222222211112212221211--------------1---------1-111111111111111111111111-1111111111-111111111112122211-2-1111111111111111-111-11111--1-11------22---------------------12111-1111--111111111-111---1------------------------------1-1---1111211111111111111111122221111111121112223211-11231-1212122122222322333333333322212122222-11-22-11321-22212121221122212222222222311111111133121-122122222212222111222212212222-112211222222222222222222222222222222212122211111121111222222222222222232222222221222222222222222222211212-22111-1111111-1-1---1-11112112221222222222222222222221222222-1111122122222222222222222222-222222222222222222222222222221222222222222222222222222222222222222222111112222122222222222222222222221222222222222222222222222222222222222222222222223222222222222222222111----111111111121111--1----1-1111---1-1112-12222222113 2222222-72222222233233332443322224442333333222323222223233222323333233332232212222222322-24222333332332324234343733333222222231326G2-2462222332222222222262222236E33233213422222323r3323335673453443335 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 568 STR:RPRED 97.6 SQ:SECSTR ############cccHHHHHHHHHHHHGGGTTcccccccccEcEEEcccEETTccccHHHHHHHHHHHHHHHHHTTcEEEEEEcccHHHHHHHHHHHHHHHHHHTTccccHHHcccEEEETTcHHHHHHHHHHHHHHHHTTcEEEEEEEEEEETTTTEEccTTTccTTccTTTccccEEEEEEEEEEcGGGGHHHHHHHHHTcTTcEEcHHHcccccEEcEEETTTcccccEETTEEEEEEcHHHHHHTHHHHTTTTTTcHHHHHHGGGEEEEEEGcccEEGGHHHHHTHHHHHHHHTcccccEEEEEccEEcTTcccccTTTTHHHHHHcHHHHHHHHHHHccTTccEEccHHHHHHHHHHHcHHcccEEEEEEEcccHHHHHHHHTccHHHHHHHTTccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccTTcccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcTTTTTcHHHHccTGGGHHHHHHHHHHHccccTEEETcccccEEEccccccccHHHHHHHHHTccccccccEEEEEccccc## DISOP:02AL 1-11,14-15,23-40,154-165,579-579,581-583| PSIPRED cccccccccccccHHHHHHHHHHHHHcccccccccccccccccEEEEccccccccccHHHHHHHHHHHHHHHHcccEEEEEEEccccccccHHHHHHHHHHHHHcccccccccccccccEEEEEHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHccHHHHccccccccEEEEEEcccccccEEEcccEEEEEEccccccccccEEEEEccccccEEccccccccEEEEccccccccHHHHHHHHHcccccccccccccEEEEEEEccccccccHHHHHHHHccccccccccccHHHHHHHHHccccHHHHHHHHHHHcccccccEEEEccHHHHHHHHccccccccHHcccccEEEEEccccccHHHHHcccccccccccEEEEccccEEEEEHHHccccccccEEEEccccEEEEEccEEEEEEEEEEcccccEEEEEEEEccccccccccccccccccEEEEEEccccEEEEEEEccccccccccccccccHHHHcccccEEEEEEEEccHHHHcccccEEEEEEEEEEEEcccccccccEEEEEEEEccccccc //