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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07766.1
DDBJ      :             porin, gram-negative type
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  55/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
f.4.3
:361 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   26->361 2fgrA PDBj 3e-17 29.8 %
:RPS:PDB   20->361 1bt9A PDBj 6e-22 14.7 %
:RPS:SCOP  27->361 1e54A  f.4.3.1 * 1e-39 29.4 %
:HMM:SCOP  26->361 1e54A_ f.4.3.1 * 3e-66 35.0 %
:RPS:PFM   40->352 PF00267 * Porin_1 2e-13 31.8 %
:HMM:PFM   60->125 PF00267 * Porin_1 9.5e-07 23.8 63/336  
:HMM:PFM   303->361 PF04338 * DUF481 0.00022 29.3 58/210  
:BLT:SWISS 26->361 OMP_BORPE 2e-17 31.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07766.1 GT:GENE ABF07766.1 GT:PRODUCT porin, gram-negative type GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(963898..964983) GB:FROM 963898 GB:TO 964983 GB:DIRECTION - GB:PRODUCT porin, gram-negative type GB:PROTEIN_ID ABF07766.1 GB:DB_XREF GI:93353677 LENGTH 361 SQ:AASEQ MKKQYKPALKLAAIAATLFSGAAMAQSSVTLYGMADAFIGGVKNPGSGDRAYVVNSGGMQTSYWGIKGTEDLGMGTKAIFDLNGFFRPDTGSMGRFTGDSMFSRNAFVGLTNETYGTLKIGRNTTPYFVSTILFNPLVDSYTFSPMIFHTYFPTPQNVGGVSDPGILGDSGWNNSLLYSTPNFGGLTANFIYGFGESPGNNGKNKWGGNLTYFSGNFAATLAFQQVKFDVAPFDPQNANLAGLDKQSAVQAGVTYDFKIVKAFLQGQYIKTNFNTSTNGGDIKHIDGQAGVAVPVGAGNILASYTYGRVLNEVAGIKRNTFAVAYDYNLSKRTDVYGAYYYDKVSGVEHGDTFGVGVRHRF GT:EXON 1|1-361:0| BL:SWS:NREP 1 BL:SWS:REP 26->361|OMP_BORPE|2e-17|31.2|308/385| SEG 199->209|gnngknkwggn| SEG 289->298|agvavpvgag| BL:PDB:NREP 1 BL:PDB:REP 26->361|2fgrA|3e-17|29.8|309/332| RP:PDB:NREP 1 RP:PDB:REP 20->361|1bt9A|6e-22|14.7|327/340| RP:PFM:NREP 1 RP:PFM:REP 40->352|PF00267|2e-13|31.8|289/306|Porin_1| HM:PFM:NREP 2 HM:PFM:REP 60->125|PF00267|9.5e-07|23.8|63/336|Porin_1| HM:PFM:REP 303->361|PF04338|0.00022|29.3|58/210|DUF481| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00267|IPR001702| GO:PFM GO:0006810|"GO:transport"|PF00267|IPR001702| GO:PFM GO:0016020|"GO:membrane"|PF00267|IPR001702| RP:SCP:NREP 1 RP:SCP:REP 27->361|1e54A|1e-39|29.4|309/332|f.4.3.1| HM:SCP:REP 26->361|1e54A_|3e-66|35.0|309/0|f.4.3.1|1/1|Porins| OP:NHOMO 1017 OP:NHOMOORG 57 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------44426VegddYSMJKGUUmcSQOMAP*T*ESMS--EDH15323C85464372----11----------32--------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------3---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 347 STR:RPRED 96.1 SQ:SECSTR ##############ccEEEEEEEETTEEEEEEEEEEEEEEEcccccTTcccEEEccEEccEEEEEEEEEEEEETTEEEEEEEEEEEEccccccTTTTTTccEEEEEEEEEEETTTEEEEEEEEEcTTHHHHGGGccccccccTTccTTcTTccEEEETTcccccccTTEEEEEEEHHHHTcTTEEEEEEEEcccccccGGccccEEEEEEEEEETTEEEEEEEEEEEccHHHHTcccccccEEEEEEEEEEEEETTEEEEEEEEEEEcccEEEETTTTEEEEccEEEEEEEEEEEccTTcEEEEEEEEEEEETTTEEEEEEEEEEEEEccccEEEEEEEEEEcccTcccccEEEEEEEEEc DISOP:02AL 1-5| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEEEEEcccccccEEEEccccccccEEEEEEEEEccccEEEEEEEEEEEEEccccccccccccEEEEEEEEEEccccEEEEEEcccccHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEEEEEEccccccEEEEEEEEccccccccccccccccEEEEcccEEEEEEEEEccccccccccccccccccccEEEEEEEEEEEEccEEEEEEEEEEEcccccccccccEEEEEEEEEEEEEEcccEEEEEEEEEEEcccccccccEEEEEEEEEEccccEEEEEEEEEEEEcccccccEEEEEEEEcc //