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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07774.1
DDBJ      :             fatty acid desaturase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  77/915 : Eukaryota  14/199 : Viruses  0/175   --->[See Alignment]
:393 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   242->334 2c1gA PDBj 2e-04 16.5 %
:RPS:PFM   99->278 PF00487 * FA_desaturase 3e-04 31.5 %
:HMM:PFM   90->347 PF00487 * FA_desaturase 7.6e-30 21.8 238/257  
:BLT:SWISS 89->336 DESA_SPIPL 1e-24 29.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07774.1 GT:GENE ABF07774.1 GT:PRODUCT fatty acid desaturase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(972207..973388) GB:FROM 972207 GB:TO 973388 GB:DIRECTION - GB:PRODUCT fatty acid desaturase GB:PROTEIN_ID ABF07774.1 GB:DB_XREF GI:93353685 InterPro:IPR005804 InterPro:IPR010257 LENGTH 393 SQ:AASEQ MTAPSDTLSPADADAISQAPNHGTNRPKRPAKNIPLPEPIAFEAPFPNRKTIRSWLIPLGGRSTARALLLFAFDYALFAAVLAGVVLASPWWAKVGLGVLAGLIIARLFIIGHDACHQSLTDRRGLNKWLGRLTFLPSLTPYSLWEVGHNVVHHGYTNLKGFDFVWAPYSLEEFRALPRSRRILERIYRNGLGAGLYYLIEIWWFKLFFPSKRQMATRRPIFMWDCALVGAFGAVWIGALVWLAVATGQSPLLLVGTGFVLPFLIWNATVGFVLYVHHTHTSVAWYDTKAMWAKAQPFVSTTVHLRFNFGIGAALHHIMEHTAHHVDMSIPLYQLKRAQALLEHALPGRIIIEKFSWRWYFHTAHRCKLYDFKALCWTDFRGRQTSENAPTPV GT:EXON 1|1-393:0| BL:SWS:NREP 1 BL:SWS:REP 89->336|DESA_SPIPL|1e-24|29.6|233/351| TM:NTM 5 TM:REGION 63->85| TM:REGION 94->116| TM:REGION 190->211| TM:REGION 221->243| TM:REGION 254->276| SEG 65->88|aralllfafdyalfaavlagvvla| RP:PDB:NREP 1 RP:PDB:REP 242->334|2c1gA|2e-04|16.5|85/384| RP:PFM:NREP 1 RP:PFM:REP 99->278|PF00487|3e-04|31.5|165/251|FA_desaturase| HM:PFM:NREP 1 HM:PFM:REP 90->347|PF00487|7.6e-30|21.8|238/257|FA_desaturase| GO:PFM:NREP 3 GO:PFM GO:0006629|"GO:lipid metabolic process"|PF00487|IPR005804| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00487|IPR005804| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00487|IPR005804| OP:NHOMO 128 OP:NHOMOORG 91 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------22-4112----------22-31121---------------11----12-----111--1-1111-2211--1---1111------1-1---------------------------------------------------------------------------------------------------------------------------------------------------------1-13--1---1---------------------1------1--11111--1---1-----1-1----------------------------------------------1----------------1111----111111-2-111111----1-----1----------------------------------------------------------------------------------11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------11------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--22-7---117113-33----11- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 85 STR:RPRED 21.6 SQ:SECSTR #################################################################################################################################################################################################################################################HHHHHHcccc#####cEEccGGGcccHHHHHHcccEEEcccEEccHH###HHccHHHHHHHHHHHccTTEEEEEETTcHHHHHHHHHHHHHHH########################################################### DISOP:02AL 1-8,16-33,386-394| PSIPRED ccccccccccccHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHcccEEcccccHHHHEEccccccHHHHHcccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHEEEEEcccccccccccccccccccccc //