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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07787.1
DDBJ      :             transcriptional regulator, TetR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  135/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:236 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->146 2eh3A PDBj 2e-11 26.9 %
:RPS:PDB   10->213 3b6cA PDBj 6e-18 15.1 %
:RPS:SCOP  10->75 3c07A1  a.4.1.9 * 2e-16 33.3 %
:HMM:SCOP  1->88 1t33A1 a.4.1.9 * 9.5e-15 28.7 %
:RPS:PFM   16->62 PF00440 * TetR_N 2e-05 38.3 %
:HMM:PFM   16->61 PF00440 * TetR_N 4.1e-16 39.1 46/47  
:HMM:PFM   68->142 PF06304 * DUF1048 0.00017 20.0 75/103  
:BLT:SWISS 1->86 ACRR_SHIFL 6e-10 36.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07787.1 GT:GENE ABF07787.1 GT:PRODUCT transcriptional regulator, TetR family GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 988843..989553 GB:FROM 988843 GB:TO 989553 GB:DIRECTION + GB:PRODUCT transcriptional regulator, TetR family GB:PROTEIN_ID ABF07787.1 GB:DB_XREF GI:93353698 InterPro:IPR001647 LENGTH 236 SQ:AASEQ MEAKPQAGPRRTRDRILDVSLRLFNELGEPNVTTTTIAEAMEISPGNLYYHFRNKDDIINSIFVRFEQEMERRLKMPEDHKATLGESWGYLQYMSEFLWNYRFLYRDINDLLARNRMLETNFKRIVDQKKRFALEICRQFQEDGDMDATPEQVDAICTNIVVIATYWLSFQFVQHPRQYNDPEQIRGYLHGSSYHIFSILAPYLRGKAREAFDQLAREYAAEKAAADAAKLEKDRK GT:EXON 1|1-236:0| BL:SWS:NREP 1 BL:SWS:REP 1->86|ACRR_SHIFL|6e-10|36.0|86/215| SEG 215->235|lareyaaekaaadaaklekdr| BL:PDB:NREP 1 BL:PDB:REP 12->146|2eh3A|2e-11|26.9|130/170| RP:PDB:NREP 1 RP:PDB:REP 10->213|3b6cA|6e-18|15.1|186/202| RP:PFM:NREP 1 RP:PFM:REP 16->62|PF00440|2e-05|38.3|47/47|TetR_N| HM:PFM:NREP 2 HM:PFM:REP 16->61|PF00440|4.1e-16|39.1|46/47|TetR_N| HM:PFM:REP 68->142|PF06304|0.00017|20.0|75/103|DUF1048| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00440|IPR001647| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00440|IPR001647| RP:SCP:NREP 1 RP:SCP:REP 10->75|3c07A1|2e-16|33.3|66/75|a.4.1.9| HM:SCP:REP 1->88|1t33A1|9.5e-15|28.7|87/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 158 OP:NHOMOORG 135 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------1-----------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--11------------1-------------------1---1-1---------------------------------1-------1111111111111111111111111111--11111111-1112---1----211111111------1-------------------1--------------------------------1-1---22-12-1--1-1111111111111111121-------------11---1-------------------------------111---------------------------------------------------------12-----------------1111111-----22222222222221221----------11121111111111------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 212 STR:RPRED 89.8 SQ:SECSTR ##ccccccHcccHHHHHHHHHHHHHHHcGGGccHHHHHHHHTccHHHHHHHHccHHHHHHHHHHHHGGGcccccccTTcHHHHHHHHHHHHHHHHHHHHHcTTHHHccccHHTTcccccHHHHHHHHHHHHHHHHHHTTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHTccTTTcHTTcHHHHHTHHHHHcccHHHHHHH###################### DISOP:02AL 1-15,227-229,232-237| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //