[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07806.1
DDBJ      :             putative transporter signal peptide protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  191/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.93.1
:417 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   48->388 3i45A PDBj 1e-17 25.9 %
:RPS:PDB   24->378 3eafA PDBj 3e-40 17.6 %
:RPS:SCOP  23->349 1usgA  c.93.1.1 * 4e-54 24.1 %
:HMM:SCOP  22->386 1usgA_ c.93.1.1 * 8e-68 29.8 %
:RPS:PFM   49->344 PF01094 * ANF_receptor 3e-19 31.7 %
:BLT:SWISS 23->414 LIVB4_BRUME 7e-46 28.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07806.1 GT:GENE ABF07806.1 GT:PRODUCT putative transporter signal peptide protein GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1005308..1006561 GB:FROM 1005308 GB:TO 1006561 GB:DIRECTION + GB:PRODUCT putative transporter signal peptide protein GB:PROTEIN_ID ABF07806.1 GB:DB_XREF GI:93353717 LENGTH 417 SQ:AASEQ MRVWMAAALFCAAAAAQAQTGAPIRLGMIDGLSGPFANAGEAVVRNLRIAIERVNASGGVKLPDGPHPFELVTFDSKGNVDESLIQFRSLVDKRIPFVLQGNSSAVASALVGAINRQNARQPDARVLFLNYSAVDPSLTNENCSFWHFRFDASADMRMQALTEAIRSERSVRKVYLIDQDYSFGHQVARSAREMLATKRPDIQIVGDEFHPIGKIKDFAPYIAKIKASGADAVITGNWGNDLTLMVKAAREGGLNARFYTFYGNGLGAPAAMGDAGVGRVLAVAEWHPNVGGAASDAFYQSFRARYPDPRDDYVHLRMQMMVEMLARAIERAGSTDAVAVGYALEDMRFTNAFHEATVRAEDHQVLQPLYVSVMAKRGGDVRFDNEGSGYGFRTIKKLKTAQTTLPTTCRMERPPRN GT:EXON 1|1-417:0| BL:SWS:NREP 1 BL:SWS:REP 23->414|LIVB4_BRUME|7e-46|28.3|382/416| SEG 6->22|aaalfcaaaaaqaqtga| BL:PDB:NREP 1 BL:PDB:REP 48->388|3i45A|1e-17|25.9|321/378| RP:PDB:NREP 1 RP:PDB:REP 24->378|3eafA|3e-40|17.6|341/379| RP:PFM:NREP 1 RP:PFM:REP 49->344|PF01094|3e-19|31.7|278/319|ANF_receptor| RP:SCP:NREP 1 RP:SCP:REP 23->349|1usgA|4e-54|24.1|307/345|c.93.1.1| HM:SCP:REP 22->386|1usgA_|8e-68|29.8|346/0|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 465 OP:NHOMOORG 193 OP:PATTERN ------------------------3------------------------------------------- --------------------------------------------1------------------------------1------1--------------------------------------------1-----1---11-1---13-----------2----1--------11-----1----2--1---------------------------------1----------------------------------------------------------------------------------------------------------1-----------------------2---1--1-------------2--------------5651-13357222232222222-12C1-B151---2----12111--46---2141112111--------4----3-1-----------------------------------6985A24445212222335233332333568451156422556945479-3-----------------211-5-------------2-2--3---2222--12-------------------------------2----------------------------------------1----1111111111-1111111111111111111111----------------------1111111-----------------------------1-1---------------------------------11311112111-----------------------------------------------------------------------------------------------1- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 366 STR:RPRED 87.8 SQ:SECSTR ######################EEEEEEEEccccTTHHHHHHHHHHHHHHHHHHHHHcEEcTTccEEEEEEEEEEcTTcHHHHHHHHHHHHHTTcccEEEEccHHHHHHHHHHHHHHTHHHGGGTcEEEEccccGGGTGcTTTcTTEEcccccHHHHHHHHHHHHHHHHccEEEEEEcTTcHHHHTTHHHHHHHTHTGGGTEEEEEEEEccTTccHHHHHHHHHHHTTcccEEEEcccHHHHHHHHHHHHHHTcccEEEcGGGccTTHHHHHcGGGTTcEEEEEccGGcTTcHHHHHHHHHHHTTccGGGccHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHcccccTTccTTcccccccEEEEEEcTTcTEEEEEcGGG############################# DISOP:02AL 1-1,415-418| PSIPRED ccHHHHHHHHHHHHHHcccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEEccccHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHccccccccEEEEEEcccccHHcccccccEEEEEcccHHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHHHHcccccEEEEEEEccccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHcccccEEEEEEEcccHHHHHccHHHcccEEEEEccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccEEEEEEcccccccccEEEEEEEEEcccEEEEcccccccccEEEEEccHHHccccccccccccccc //