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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07815.1
DDBJ      :             NADH (or F420H2) dehydrogenase, subunit C
Swiss-Prot:NUOC_RALME   RecName: Full=NADH-quinone oxidoreductase subunit C;         EC=1.6.99.5;AltName: Full=NADH dehydrogenase I subunit C;AltName: Full=NDH-1 subunit C;

Homologs  Archaea  19/68 : Bacteria  567/915 : Eukaryota  150/199 : Viruses  0/175   --->[See Alignment]
d.307.1
:199 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   50->157 3i9v5 PDBj 5e-23 49.0 %
:RPS:PDB   8->194 2c6zA PDBj 2e-26 13.1 %
:RPS:SCOP  6->171 2fug51  d.307.1.1 * 3e-44 37.4 %
:HMM:SCOP  5->181 2fug51 d.307.1.1 * 1.2e-52 52.1 %
:RPS:PFM   41->153 PF00329 * Complex1_30kDa 2e-23 57.8 %
:HMM:PFM   40->153 PF00329 * Complex1_30kDa 6.9e-33 44.7 103/103  
:BLT:SWISS 1->199 NUOC_RALME e-116 100.0 %
:PROS 120->141|PS00542|COMPLEX1_30K

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07815.1 GT:GENE ABF07815.1 GT:PRODUCT NADH (or F420H2) dehydrogenase, subunit C GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1013397..1013996 GB:FROM 1013397 GB:TO 1013996 GB:DIRECTION + GB:PRODUCT NADH (or F420H2) dehydrogenase, subunit C GB:PROTEIN_ID ABF07815.1 GB:DB_XREF GI:93353726 InterPro:IPR001268 InterPro:IPR010218 LENGTH 199 SQ:AASEQ MANLDTLKAALEKVLGKRVQNLIEATGELTLIVKAADYLEVARLLRDDPSLRFEQLLDLCGVDYSDYAEGAWDGLRFAAVSQLLSVTHNWRLRLRVFAPDDDFPVLPSVINVWNSVNWFEREAFDFYGIVFEGHPDLRRILTDYGFVGHPFRKDFPVSGYVEMRYDPEQKRVIYQPVTIEPREVTPRVIREENYGGTQH GT:EXON 1|1-199:0| SW:ID NUOC_RALME SW:DE RecName: Full=NADH-quinone oxidoreductase subunit C; EC=1.6.99.5;AltName: Full=NADH dehydrogenase I subunit C;AltName: Full=NDH-1 subunit C; SW:GN Name=nuoC; OrderedLocusNames=Rmet_0929; SW:KW Cell inner membrane; Cell membrane; Complete proteome; Membrane; NAD;Oxidoreductase; Quinone; Transport; Ubiquinone. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->199|NUOC_RALME|e-116|100.0|199/199| GO:SWS:NREP 7 GO:SWS GO:0005886|"GO:plasma membrane"|Cell inner membrane| GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0016491|"GO:oxidoreductase activity"|Oxidoreductase| GO:SWS GO:0055114|"GO:oxidation reduction"|Oxidoreductase| GO:SWS GO:0048038|"GO:quinone binding"|Quinone| GO:SWS GO:0006810|"GO:transport"|Transport| PROS 120->141|PS00542|COMPLEX1_30K|PDOC00468| BL:PDB:NREP 1 BL:PDB:REP 50->157|3i9v5|5e-23|49.0|104/196| RP:PDB:NREP 1 RP:PDB:REP 8->194|2c6zA|2e-26|13.1|168/273| RP:PFM:NREP 1 RP:PFM:REP 41->153|PF00329|2e-23|57.8|102/103|Complex1_30kDa| HM:PFM:NREP 1 HM:PFM:REP 40->153|PF00329|6.9e-33|44.7|103/103|Complex1_30kDa| GO:PFM:NREP 2 GO:PFM GO:0008137|"GO:NADH dehydrogenase (ubiquinone) activity"|PF00329|IPR001268| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00329|IPR001268| RP:SCP:NREP 1 RP:SCP:REP 6->171|2fug51|3e-44|37.4|155/191|d.307.1.1| HM:SCP:REP 5->181|2fug51|1.2e-52|52.1|167/0|d.307.1.1|1/1|Nqo5-like| OP:NHOMO 816 OP:NHOMOORG 736 OP:PATTERN ------11------11--------2---1111-----------------1111----11--111--1- 22212---------11111-11--11111111111111111111-1--1-----------11112112221-----------11-22211111---1--1-11--22211--------------11111111112112222111211111111111111111-11121111-1-1-111-1--11111----1-111111111111111------111111----------1-----------------------------------------------------------------------------------------------1-----------------------1--1-1111----11-------22-111111111111111112222211111111111-11111111111111112221212211111111111111111111111222-11111121112211111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111121111---1---12---1-222122213222212-11-11111111111111111111-1111111---------------------1----11--211111111111111111111111111-1111111111111111111111111111111111111111111111111111-111111111111-1111111111111--1----------------11111111111-1111111111111-1111111111111--------------11111111111111111-111111----------------------------------------------111 ------1-----21111111111111111111111111111111111111111111111111111----1--111------11111---12111111111111111-12-2321111111111-11121151-2211111111111111111-1112111221211211--2221111--------1121-1------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 184 STR:RPRED 92.5 SQ:SECSTR #######HHHHHHHHHHHHHHHHTTTccEEEEEcccTTcTTTTcGGG#GEEEETTEEEEcccccTTcccccccGGGTTHHHHHHHHHHHTTcEEEEcccTTccccccccTTTGGGEEEcccEEEEEEcccHHHHHHHHHHcTTcEEEEEEccccccGGGc##EEEEETTEEEEEccHHHHHHHHHHHHHccccc##### DISOP:02AL 1-4,197-200| PSIPRED cccHHHHHHHHHHHccccEEEEEEEccEEEEEEcHHHHHHHHHHHHHcccccccEEEEEEEEEEccccccccccccEEEEEEEEEcccccEEEEEEEEccccccccccHHHccccccHHHHHHHHHccEEEcccccccccccccccccccccccccccccEEEEEcccccEEEccccEEcHHHcccEEEEccccccccc //