[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07854.1
DDBJ      :             acyl-CoA dehydrogenase-like protein
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  480/915 : Eukaryota  175/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:420 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->406 2wbiA PDBj e-125 59.2 %
:RPS:PDB   1->402 3d9dC PDBj 1e-71 17.6 %
:RPS:SCOP  1->249 1rx0A2  e.6.1.1 * 6e-42 24.8 %
:RPS:SCOP  253->402 1siqA1  a.29.3.1 * 4e-31 18.9 %
:HMM:SCOP  2->263 1w07A3 e.6.1.2 * 2.6e-65 35.0 %
:HMM:SCOP  250->402 1bucA1 a.29.3.1 * 3.2e-43 35.8 %
:RPS:PFM   60->133 PF02771 * Acyl-CoA_dh_N 4e-07 44.4 %
:RPS:PFM   137->191 PF02770 * Acyl-CoA_dh_M 1e-10 51.9 %
:RPS:PFM   250->398 PF00441 * Acyl-CoA_dh_1 4e-18 34.0 %
:HMM:PFM   250->398 PF00441 * Acyl-CoA_dh_1 2.4e-40 34.0 147/150  
:HMM:PFM   137->191 PF02770 * Acyl-CoA_dh_M 1.3e-20 44.2 52/52  
:HMM:PFM   6->133 PF02771 * Acyl-CoA_dh_N 5.8e-14 23.4 111/113  
:BLT:SWISS 6->412 ACD10_MOUSE e-130 56.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07854.1 GT:GENE ABF07854.1 GT:PRODUCT acyl-CoA dehydrogenase-like protein GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(1051692..1052954) GB:FROM 1051692 GB:TO 1052954 GB:DIRECTION - GB:PRODUCT acyl-CoA dehydrogenase-like protein GB:PROTEIN_ID ABF07854.1 GB:DB_XREF GI:93353765 InterPro:IPR006090 InterPro:IPR006091 InterPro:IPR013107 LENGTH 420 SQ:AASEQ MQFEYTPKVKEMQARLLAFFDQHIYPNEKRFYAEIQANRAAGNAWIPTKVIEELKPLAREAGLWNLFLPRSKRAPEGLSNLEYAPMCEIMGRVPWSAEVFNCAAPDTGNMETLERYASEELKDEWLEPLLRGEIRSAFLMTEPAVASSDATNIECRIERDGDHYVINGTKWWSSGAGDPRCKVYIVMGKTDPNAGRHEQQSMIVVPADTPGITIKRFLPVFGYDDAPHGHMEIELKNVRVPVSNILLGEGRGFEIAQGRLGPGRIHHCMRSIGVAERALELMCKRSLERVAFGKQIARQGVTQERIAEARCDIEMARLLTLKAAYMMDTVGNKIAKAEIAMIKVVAPNVALRVIDWAIQVHGAAGVSGDFPLANWWAHQRTLRLADGPDEVHRNAIAKLELAKHMKLNPDSIQMPITRGS GT:EXON 1|1-420:0| BL:SWS:NREP 1 BL:SWS:REP 6->412|ACD10_MOUSE|e-130|56.6|403/1069| BL:PDB:NREP 1 BL:PDB:REP 6->406|2wbiA|e-125|59.2|387/394| RP:PDB:NREP 1 RP:PDB:REP 1->402|3d9dC|1e-71|17.6|392/430| RP:PFM:NREP 3 RP:PFM:REP 60->133|PF02771|4e-07|44.4|72/113|Acyl-CoA_dh_N| RP:PFM:REP 137->191|PF02770|1e-10|51.9|52/53|Acyl-CoA_dh_M| RP:PFM:REP 250->398|PF00441|4e-18|34.0|147/150|Acyl-CoA_dh_1| HM:PFM:NREP 3 HM:PFM:REP 250->398|PF00441|2.4e-40|34.0|147/150|Acyl-CoA_dh_1| HM:PFM:REP 137->191|PF02770|1.3e-20|44.2|52/52|Acyl-CoA_dh_M| HM:PFM:REP 6->133|PF02771|5.8e-14|23.4|111/113|Acyl-CoA_dh_N| GO:PFM:NREP 6 GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02771|IPR006092| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02771|IPR006092| GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02770|IPR006091| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02770|IPR006091| GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 1->249|1rx0A2|6e-42|24.8|226/231|e.6.1.1| RP:SCP:REP 253->402|1siqA1|4e-31|18.9|148/154|a.29.3.1| HM:SCP:REP 2->263|1w07A3|2.6e-65|35.0|243/0|e.6.1.2|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 250->402|1bucA1|3.2e-43|35.8|151/151|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 5154 OP:NHOMOORG 685 OP:PATTERN 22----5655755644-232321C96651-7B-----------------------------3441--- 4446Q2-5---746PxgHH-Hb22ddHHHHHQZdmdPb**4Y8V1123-11-445637--EBP1BCPIHID--------383A-----------11---41445564524--------------------------66577---93-1--------------------11-------------67767---A735555545555555553455545557AA8A11------42-------------------1----------------------------------------------------------------------11315444444444423222221-6-3-4-13-991595-17---11-3-61-JFFL-----1-NFF332JAJHG66565664534-22922A2876P-4332314334457B7L98994544B7E111111116----774------------------------------HFMH16LC8J779AG87477766FABBBB5BH5ONebZ-3BC8638CCJAEDGV--5----34-------1-1B342QA9-----------765-8-5--77779765---------------------------32-47154A613222234522225253243---1---------2-3-1--2223233222-2222222212222222221-------13231333332313113-1121111-----------------3111114444-CA-----------------DDEBD8B4652-EEEG6B78A86777323-------------2-----24-224433333333-------2886677----------1-------------------------1--11-1------ ----358-531-AA8CAAA9777967A99585766789897998A97366579B785554453-111--1--1-1------11111---464A5446455766A9C-B65GDTBBDC56479D6HA3I7U*D-EBR6564C65HB39954A62F9BBBI7BH7DBD476BAEHDG-222I42243425972442D8987 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 406 STR:RPRED 96.7 SQ:SECSTR ccccccHHHHHHHHHHHHHHHHTGGGHHHHHTTcccHHHHHHcHcccHHHTHHHHHHHHHTTTTGGGccGGGTccccccHHHHHHHHHHHHTTccTTHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccEEEcccTTccTTTccccccEEEEETTEEEEEEEEEccTTTTTccccEEEEEEEEcTTccGGGGEEEEEEcHHHHHTccGGGEEEEEcccccccTTEEEEEEEEEEGGGccccTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccTTcccGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcGGGGcTTccHHHHHHHHTTTTTccccTTTTHHHHHHHHHHTTcc############## DISOP:02AL 418-421| PSIPRED ccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccHHHcccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccEEEEEEccccccccccHHHcEEEEEEEccEEEEEEEEEEEcccccccccEEEEEEEccccccccccEEEEEEEcccccEEEEcccccccccccccccEEEEEccEEccHHHHccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHccc //