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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07899.1
DDBJ      :             transcriptional regulator, TetR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  40/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:209 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   30->83 1zkgA PDBj 6e-06 31.5 %
:RPS:PDB   30->190 2dtzB PDBj 2e-10 8.3 %
:RPS:SCOP  30->88 1t33A1  a.4.1.9 * 9e-11 36.2 %
:HMM:SCOP  22->100 2fbqA1 a.4.1.9 * 2.4e-12 27.8 %
:RPS:PFM   30->75 PF00440 * TetR_N 2e-06 39.1 %
:HMM:PFM   30->75 PF00440 * TetR_N 1.1e-12 34.8 46/47  
:HMM:PFM   156->198 PF03169 * OPT 9.9e-05 21.4 42/617  
:BLT:SWISS 30->75 UIDR_SHIFL 9e-05 30.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07899.1 GT:GENE ABF07899.1 GT:PRODUCT transcriptional regulator, TetR family GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1103336..1103965 GB:FROM 1103336 GB:TO 1103965 GB:DIRECTION + GB:PRODUCT transcriptional regulator, TetR family GB:PROTEIN_ID ABF07899.1 GB:DB_XREF GI:93353810 InterPro:IPR001647 LENGTH 209 SQ:AASEQ MAPMTTELSPARRYRGAEAEERRAQRRGQLIAAAVQVYGERGYQNATVKAVCEAAGLTERYFYESFANSEALLLASFQTVTDLLLQKIELAGEAAGGDGEHRALAILRAYFGTLQCEPRSARVFLVEIRGVSKLVDEALGLSLRDFGGLLARVLMPEGKEPDPMLLAGVAGGIIHVALHWIRHGYAPDVDTVAATALQLALVLKDRQRS GT:EXON 1|1-209:0| BL:SWS:NREP 1 BL:SWS:REP 30->75|UIDR_SHIFL|9e-05|30.4|46/196| SEG 11->29|arryrgaeaeerraqrrgq| SEG 89->100|elageaaggdge| SEG 191->203|tvaatalqlalvl| BL:PDB:NREP 1 BL:PDB:REP 30->83|1zkgA|6e-06|31.5|54/193| RP:PDB:NREP 1 RP:PDB:REP 30->190|2dtzB|2e-10|8.3|157/182| RP:PFM:NREP 1 RP:PFM:REP 30->75|PF00440|2e-06|39.1|46/47|TetR_N| HM:PFM:NREP 2 HM:PFM:REP 30->75|PF00440|1.1e-12|34.8|46/47|TetR_N| HM:PFM:REP 156->198|PF03169|9.9e-05|21.4|42/617|OPT| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00440|IPR001647| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00440|IPR001647| RP:SCP:NREP 1 RP:SCP:REP 30->88|1t33A1|9e-11|36.2|58/88|a.4.1.9| HM:SCP:REP 22->100|2fbqA1|2.4e-12|27.8|79/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 41 OP:NHOMOORG 40 OP:PATTERN -------------------------------------------------------------------- -------------------------1----------1-12---------------------------1-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111111111111--1111-111-1111--11-------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111111----------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 161 STR:RPRED 77.0 SQ:SECSTR #############################HHHHHHHHHHHccTTTccHHHHHHTTTccTTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHccccGGGHHHHHHHHTccccTTTTTTTHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHHHHHTTccccHHHHH################### DISOP:02AL 1-26,207-210| PSIPRED cccccHHHcHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccc //