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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07921.1
DDBJ      :             short-chain dehydrogenase/reductase SDR
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  93/915 : Eukaryota  55/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:256 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   89->245 1z6zE PDBj 5e-11 34.2 %
:RPS:PDB   35->237 3dwfA PDBj 3e-14 16.6 %
:RPS:SCOP  35->244 1pwxA  c.2.1.2 * 1e-15 17.3 %
:HMM:SCOP  5->241 1zemA1 c.2.1.2 * 2.9e-38 30.6 %
:RPS:PFM   46->178 PF00106 * adh_short 4e-06 33.6 %
:HMM:PFM   11->179 PF00106 * adh_short 4.6e-25 27.7 159/167  
:BLT:SWISS 36->250 BZRD_BACCE 1e-31 37.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07921.1 GT:GENE ABF07921.1 GT:PRODUCT short-chain dehydrogenase/reductase SDR GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(1124241..1125011) GB:FROM 1124241 GB:TO 1125011 GB:DIRECTION - GB:PRODUCT short-chain dehydrogenase/reductase SDR GB:PROTEIN_ID ABF07921.1 GB:DB_XREF GI:93353832 InterPro:IPR002198 InterPro:IPR002347 LENGTH 256 SQ:AASEQ MTTGTPRSTHLYIVTGASRGLGAALVRALLVPGNRVIGVARSRNPELEAEATASGVRVAWHLQDLSQPGPSAGWLASVLDAVEEAPASITLILNAGVVEPIGPITQLHDSTLVPHLQTNLVTPMTMTGAFIEHTVRFDCPRKVLAISSGAARNPVPGWSAYCAGKAGLDMFIRSVNTEYASVPEPRTLRAVALAPGVVDTGMQETIRGADFAQVQRFRDLKDNEQLASPDDTARRIVAYLARPDFGTTELDDIRKY GT:EXON 1|1-256:0| BL:SWS:NREP 1 BL:SWS:REP 36->250|BZRD_BACCE|1e-31|37.1|213/249| SEG 16->33|gasrglgaalvrallvpg| BL:PDB:NREP 1 BL:PDB:REP 89->245|1z6zE|5e-11|34.2|149/257| RP:PDB:NREP 1 RP:PDB:REP 35->237|3dwfA|3e-14|16.6|187/271| RP:PFM:NREP 1 RP:PFM:REP 46->178|PF00106|4e-06|33.6|128/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 11->179|PF00106|4.6e-25|27.7|159/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 35->244|1pwxA|1e-15|17.3|196/252|c.2.1.2| HM:SCP:REP 5->241|1zemA1|2.9e-38|30.6|229/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 164 OP:NHOMOORG 148 OP:PATTERN -------------------------------------------------------------------- --1-----------1---------------------------------------------------------------------------------------1---1--------------------------------------------------------------------------------------1111111111111111--1111111----1-1-------1----------------------------------------------------------------------------------------------------------------------------------------------1-----------1---------------------------------------------------1--1111-11---------------------------------------------------111111111111111111111111-11111111--1111-11111--1--------1------------1-1------------------------------------------------------------1-----------------------------1-11---------------------------------------------------------------------------------------------------1211------------------------------------------------------------------------------------------------------------------------------------------------1- ------------122-1---11------------------------------1---------111-1---22111121122222-211-11-1--111111------1-14---------1111--1-------11-----1--1-1------1---1-----1----------------------------11----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 221 STR:RPRED 86.3 SQ:SECSTR #################################cEEEEEEccHHHHHHHHHHHHHHTccEEEEEEccTTcHHHHHHHHHHHHHHHTcccEEEEcccccccccccccccHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTcEEEEEEEEEGGGTcccTTcHHHHHHHHHHHHHHHHHHHHHHHHHTTcccEEEEEEEcccccHHHHHHHTTTcccHHHHHHHHHHHccccHHHHHHHHHHHHHccHHHEccHHHHH## DISOP:02AL 1-3| PSIPRED ccccccccccEEEEEcccccHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHHHHccEEEEEEccccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccEEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccccHHHHHHHcccHHHHHHHHHcccccccccHHHHHHHHHHHHccHHHccEEEEEEEcc //