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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07935.1
DDBJ      :             transglutaminase-like protein
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  237/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.3.1
:293 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   156->263 3isrC PDBj 5e-11 37.6 %
:RPS:PDB   134->288 1e2tA PDBj 1e-17 13.0 %
:RPS:SCOP  17->273 1x3wA1  d.3.1.4 * 2e-19 6.9 %
:HMM:SCOP  156->274 1x3zA1 d.3.1.4 * 5.3e-30 35.2 %
:RPS:PFM   12->88 PF08379 * Bact_transglu_N 1e-14 49.4 %
:RPS:PFM   158->215 PF01841 * Transglut_core 1e-09 50.0 %
:HMM:PFM   10->88 PF08379 * Bact_transglu_N 9.6e-28 44.3 79/82  
:HMM:PFM   151->245 PF01841 * Transglut_core 1.8e-24 35.5 93/113  
:BLT:SWISS 10->291 Y2599_MYCBO 6e-23 30.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07935.1 GT:GENE ABF07935.1 GT:PRODUCT transglutaminase-like protein GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1142484..1143365 GB:FROM 1142484 GB:TO 1143365 GB:DIRECTION + GB:PRODUCT transglutaminase-like protein GB:PROTEIN_ID ABF07935.1 GB:DB_XREF GI:93353846 InterPro:IPR002931 LENGTH 293 SQ:AASEQ MHVARDIPVKYKIHHKTIYRYTEPVRRSVHELRLAPRSGPLQSVQYWTLSAPGNLSEARDGFGNIVHNFTMAGPARTIAIVATGEVEVRIDPAPTGQAGAEAGEGGHGAFQDLPEAGESRVSPLYFLSGTPLTQAPADMQAFAAPYLAAGHEVPALLALADGIAERVQYRANTTDVGTSAVEAFRLGSGVCQDQAQVMVAACRALGIPARYVSGYFYDAAAASLASHAWADICLDADRGLWCSIDVTHRCITDGRHVRLAVGRDYASAAPIRGILEGGAGETMEVDIEITPLA GT:EXON 1|1-293:0| BL:SWS:NREP 1 BL:SWS:REP 10->291|Y2599_MYCBO|6e-23|30.0|277/314| SEG 96->109|gqagaeagegghga| SEG 219->230|aaaaslashawa| BL:PDB:NREP 1 BL:PDB:REP 156->263|3isrC|5e-11|37.6|101/281| RP:PDB:NREP 1 RP:PDB:REP 134->288|1e2tA|1e-17|13.0|154/274| RP:PFM:NREP 2 RP:PFM:REP 12->88|PF08379|1e-14|49.4|77/82|Bact_transglu_N| RP:PFM:REP 158->215|PF01841|1e-09|50.0|58/109|Transglut_core| HM:PFM:NREP 2 HM:PFM:REP 10->88|PF08379|9.6e-28|44.3|79/82|Bact_transglu_N| HM:PFM:REP 151->245|PF01841|1.8e-24|35.5|93/113|Transglut_core| RP:SCP:NREP 1 RP:SCP:REP 17->273|1x3wA1|2e-19|6.9|246/320|d.3.1.4| HM:SCP:REP 156->274|1x3zA1|5.3e-30|35.2|108/0|d.3.1.4|2/2|Cysteine proteinases| OP:NHOMO 380 OP:NHOMOORG 240 OP:PATTERN ------1-------11---------------------------------------------------- 11-1----------22222-2222222222222222-122-3-2--1--11-111--1------1------1---111---1----------------------1--1-----------------1-111-111-111111---1---11111------1------1-------------1--1-1-----------------------------------1----------1----------------------------------------------------------------------------------------------------------------------------------------------2211------14322---33232----------1-33333345-21-22222222222222221311222211-11111111-11-2111------------------------------2141-----13222231222222222222-11221212-2111211---3213--11-112-1-----------12--2---------------1----------3--1------------------------------11------------------------------1--------1----------------------------------11111-------------------1---------1-------------------------12-2---------------11111-1---112222-32221111-2221-1-1111--------------------------------1-11--------------------------------------------------1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 162 STR:RPRED 55.3 SQ:SECSTR #################################################################################################################################GccccccHHHHHHHHHTTcccccccHHHHHHHHHHHHccEEcHHHHTTHHHHHTTTcccccHHHHHHHHHHHHHHTTccEEEEEEEEcTTcccccccccEEEEEEEEETTEEEEEcccccTTcccccEEccccccEEETTEEEEEEccTTcEEEEEEccTEE## DISOP:02AL 1-3| PSIPRED cccccccEEEEEEEEEEEEEEccccccccEEEEEEcccccccEEEEEEEccccccEEEEcccccEEEEEEEcccccEEEEEEEEEEEEEEcccccccccccccccccccHHHccccccccccHHHHHHccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHcEEEcccccccccHHHHHHcccEEEcHHHHHHHHHHHHccccEEEEEccccccHHHHHccccEEEEEEEEcccEEEEEcccccccccccEEEEEEEccHHHcccEEEEEEccccccEEEEEEEEEcc //