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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07939.1
DDBJ      :             2-dehydro-3-deoxyphosphooctonate aldolase
Swiss-Prot:KDSA_RALEJ   RecName: Full=2-dehydro-3-deoxyphosphooctonate aldolase;         EC=2.5.1.55;AltName: Full=Phospho-2-dehydro-3-deoxyoctonate aldolase;AltName: Full=3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase;AltName: Full=KDO-8-phosphate synthetase;         Short=KDO 8-P synthase;         Short=KDOPS;

Homologs  Archaea  24/68 : Bacteria  695/915 : Eukaryota  17/199 : Viruses  0/175   --->[See Alignment]
c.1.10
:289 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->269 2nxgA PDBj 4e-72 53.8 %
:RPS:PDB   1->280 3e9aA PDBj 2e-56 43.0 %
:RPS:SCOP  1->275 1rzmA  c.1.10.4 * 2e-78 32.4 %
:HMM:SCOP  1->281 1o60A_ c.1.10.4 * 1e-98 54.2 %
:RPS:PFM   8->254 PF00793 * DAHP_synth_1 4e-37 41.0 %
:HMM:PFM   8->274 PF00793 * DAHP_synth_1 4.8e-78 34.9 255/272  
:BLT:SWISS 1->289 KDSA_RALEJ e-163 96.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07939.1 GT:GENE ABF07939.1 GT:PRODUCT 2-dehydro-3-deoxyphosphooctonate aldolase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1147018..1147887 GB:FROM 1147018 GB:TO 1147887 GB:DIRECTION + GB:PRODUCT 2-dehydro-3-deoxyphosphooctonate aldolase GB:PROTEIN_ID ABF07939.1 GB:DB_XREF GI:93353850 InterPro:IPR006218 InterPro:IPR006269 LENGTH 289 SQ:AASEQ MKLCGFDVGLDKPFFLIAGPCVIESEQMALDTAGELKAITGELGIPFIYKSSFDKANRSSGKSFRGLGMEKGLEILATVKRQIGVPVLTDIHEIDEIKPVAAVVDVLQTPAFLCRQTDFIRACAQSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLPDDVFMACERGVSFGYNNLVSDMRSLAIMRETGAPVVFDATHSVQLPGGQGTSSGGQREFVPVLSRAAVATGVAGLFMETHPDPSKAMSDGPNAVPLSRMKELLTVLRDLDGMVKRAGFLEDNFGWPACA GT:EXON 1|1-289:0| SW:ID KDSA_RALEJ SW:DE RecName: Full=2-dehydro-3-deoxyphosphooctonate aldolase; EC=2.5.1.55;AltName: Full=Phospho-2-dehydro-3-deoxyoctonate aldolase;AltName: Full=3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase;AltName: Full=KDO-8-phosphate synthetase; Short=KDO 8-P synthase; Short=KDOPS; SW:GN Name=kdsA; OrderedLocusNames=Reut_A1089; SW:KW Complete proteome; Cytoplasm; Lipopolysaccharide biosynthesis;Transferase. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->289|KDSA_RALEJ|e-163|96.9|289/289| GO:SWS:NREP 3 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0009103|"GO:lipopolysaccharide biosynthetic process"|Lipopolysaccharide biosynthesis| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| BL:PDB:NREP 1 BL:PDB:REP 14->269|2nxgA|4e-72|53.8|249/263| RP:PDB:NREP 1 RP:PDB:REP 1->280|3e9aA|2e-56|43.0|263/275| RP:PFM:NREP 1 RP:PFM:REP 8->254|PF00793|4e-37|41.0|234/278|DAHP_synth_1| HM:PFM:NREP 1 HM:PFM:REP 8->274|PF00793|4.8e-78|34.9|255/272|DAHP_synth_1| GO:PFM:NREP 1 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00793|IPR006218| RP:SCP:NREP 1 RP:SCP:REP 1->275|1rzmA|2e-78|32.4|250/338|c.1.10.4| HM:SCP:REP 1->281|1o60A_|1e-98|54.2|275/0|c.1.10.4|1/1|Aldolase| OP:NHOMO 881 OP:NHOMOORG 736 OP:PATTERN ---1--1111111111-111111-------------------------------11-111-11----- 333-----------------------------------------------------------1-------1--------1111111111111-111---111111121-112222221122222111111111121222-1222422122221--11112-1111123332-1-----1----11122111211111112112111211111111111111111111111111111111111111111111111----------11----1---21------1111--------------1111111111111----------12112111111111132111111111-13--2111432521422221-22332111111111--1111111111111111111111-1111111111211111111111111111111111111111111111111111111------------1111111111111----1-11-111111211112111111121222222211111211111111111111111111112121111111---11123111111--1111123243333212213-34111111111111111111111111122111111111111111111111111111111--11111------11111111111111111-1111111111111111111111111111111111111111111111111111111111111111111121111111111111111211111111111111111111112111121111121211111111111111112121111111211111111111111111113111111----------1---------------------------1--1-111111 ------------------------------------------------------------------------------------------------------------1------------------------------------------------------1---------11-----1--111113-41--1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 280 STR:RPRED 96.9 SQ:SECSTR EEETTEEEcTTcccEEEEEEEEcccHHHHHHHHHHHHHHHHHHTccEEEEEEcccTTcccccccccccHHHHHHHHHHHHHHHccEEEEEcccGGGHHHHHTTccEEEEcGGGTTcHHHHHHHHHTTcEEEEEccTTccGGGHHHHHHHHHHTHHHTTcTcccEEEEEccEEcccccEEccTHHHHHHHHHTccEEEEHHHGGEETTTTcccHTccGGGHHHHHHHHHHTcccEEEEEEEccGGGccccGGGcEEGGGHHHHHHHHHHHHHHHHHccccc######### DISOP:02AL 208-210,212-213| PSIPRED cEEccEEEccccEEEEEEcccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHccEEEEEEccHHHHHHHHHcccEEEEcccccccHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccHHHHHHHHHccccEEEEccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEcccHHHccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccc //