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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07961.1
DDBJ      :             DNA mismatch repair protein MutS
Swiss-Prot:MUTS_RALME   RecName: Full=DNA mismatch repair protein mutS;

Homologs  Archaea  19/68 : Bacteria  775/915 : Eukaryota  196/199 : Viruses  1/175   --->[See Alignment]
a.113.1c.37.1c.55.6d.203.1d.75.2
:916 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   41->842 1ng9A PDBj 0.0 51.0 %
:BLT:PDB   849->909 2ok2A PDBj 5e-06 49.2 %
:RPS:PDB   44->842 1e3mA PDBj e-155 45.7 %
:RPS:SCOP  40->152 1e3mA4  d.75.2.1 * 2e-49 68.1 %
:RPS:SCOP  153->304 1e3mA3  c.55.6.1 * 4e-35 32.7 %
:RPS:SCOP  307->605 1e3mA1  a.113.1.1 * 1e-95 50.8 %
:RPS:SCOP  725->827 2v4jC1  d.203.1.1 * 1e-29 14.6 %
:HMM:SCOP  38->152 1e3mA4 d.75.2.1 * 5.2e-45 53.0 %
:HMM:SCOP  153->306 1e3mA3 c.55.6.1 * 5.1e-37 39.6 %
:HMM:SCOP  307->605 1e3mA1 a.113.1.1 * 5.2e-88 44.4 %
:HMM:SCOP  606->842 1e3mA2 c.37.1.12 * 2.1e-63 36.3 %
:RPS:PFM   47->158 PF01624 * MutS_I 6e-41 66.1 %
:RPS:PFM   183->289 PF05188 * MutS_II 2e-11 34.6 %
:RPS:PFM   302->603 PF05192 * MutS_III 1e-72 49.7 %
:RPS:PFM   607->835 PF00488 * MutS_V 5e-67 56.2 %
:HMM:PFM   606->840 PF00488 * MutS_V 5.2e-99 56.9 232/234  
:HMM:PFM   302->602 PF05192 * MutS_III 1.2e-55 41.6 209/219  
:HMM:PFM   48->158 PF01624 * MutS_I 1.5e-44 54.1 111/113  
:HMM:PFM   168->292 PF05188 * MutS_II 5.2e-21 34.4 122/137  
:BLT:SWISS 1->916 MUTS_RALME 0.0 100.0 %
:PROS 730->746|PS00486|DNA_MISMATCH_REPAIR_2
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07961.1 GT:GENE ABF07961.1 GT:PRODUCT DNA mismatch repair protein MutS GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(1166857..1169607) GB:FROM 1166857 GB:TO 1169607 GB:DIRECTION - GB:PRODUCT DNA mismatch repair protein MutS GB:PROTEIN_ID ABF07961.1 GB:DB_XREF GI:93353872 InterPro:IPR000432 InterPro:IPR005748 InterPro:IPR007695 InterPro:IPR007696 InterPro:IPR007860 InterPro:IPR007861 LENGTH 916 SQ:AASEQ MSEALSVPAAEGENTVTASESPDLAATSARAEKVGKQEKPEKAEKQSPMMLQYHRIKADHPDTLLFYRMGDFYELFHDDAEKAARLLDITLTARGQSGGVPIRMAGIPFHSADQYLARLVKLGESVAICEQIGDPATSKGPVERKVVRIVTPGTLTDAALLPDKSDTFLLAVHQQTTRRGVSKTGLAWLNLASGELRLMECDAAQLSRELERIRPAEVLYTDGMDLPTLTCARTRLPEWHFDQEAGTRRLREQIGVASLEPFGCSGLGAALGAAGALLNYAATTQGQSLRHVQGVTVERESEFVGLDSATRRNLELTETLRGTESPTLFSLLDTCATTMGSRALRHWLHHPLRDPALPRARQQAIGALITQGPDGLRAVLRKLADVERITARLALLSARPRDLSSLRDTLRALPDVQAATVSSEDAPLLAQTLEEIDIPQDCLELLIRAVADEPSTVIRDGGVIARGYDSELDELRDISENCGQFLIDLETRERERTGITNLRVEYNRVHGFYIEVTNGQADKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQDRALAREKQLYDGLLQALLPHIGSLRRVAGALARLDVLATLAERAKTLDWVQPERVQENVIDISQGRHPVVEGQLAAESVAFIANDCQLNEARKLLLITGPNMGGKSTFMRQTALIVLLACVGAWVPARRAVIGPVDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHNATPSSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRSHTLFATHYFELTQLPVEFPQAANVHLSAVEHGDGIVFLHAVQDGPASQSYGLQVAQLAGVPQPVIRAARKHLAWLEEQSADATPTPQMDLFSAQSSPSADDEDDKSAGQSAVPPAQAATLEALADIDPDSLSPREALEALYRLKSISETARTV GT:EXON 1|1-916:0| SW:ID MUTS_RALME SW:DE RecName: Full=DNA mismatch repair protein mutS; SW:GN Name=mutS; OrderedLocusNames=Rmet_1075; SW:KW ATP-binding; Complete proteome; DNA damage; DNA repair; DNA-binding;Nucleotide-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->916|MUTS_RALME|0.0|100.0|916/916| GO:SWS:NREP 5 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| PROS 730->746|PS00486|DNA_MISMATCH_REPAIR_2|PDOC00388| TM:NTM 1 TM:REGION 664->684| SEG 266->278|glgaalgaagall| BL:PDB:NREP 2 BL:PDB:REP 41->842|1ng9A|0.0|51.0|786/794| BL:PDB:REP 849->909|2ok2A|5e-06|49.2|59/402| RP:PDB:NREP 1 RP:PDB:REP 44->842|1e3mA|e-155|45.7|759/765| RP:PFM:NREP 4 RP:PFM:REP 47->158|PF01624|6e-41|66.1|112/113|MutS_I| RP:PFM:REP 183->289|PF05188|2e-11|34.6|107/135|MutS_II| RP:PFM:REP 302->603|PF05192|1e-72|49.7|302/309|MutS_III| RP:PFM:REP 607->835|PF00488|5e-67|56.2|226/229|MutS_V| HM:PFM:NREP 4 HM:PFM:REP 606->840|PF00488|5.2e-99|56.9|232/234|MutS_V| HM:PFM:REP 302->602|PF05192|1.2e-55|41.6|209/219|MutS_III| HM:PFM:REP 48->158|PF01624|1.5e-44|54.1|111/113|MutS_I| HM:PFM:REP 168->292|PF05188|5.2e-21|34.4|122/137|MutS_II| GO:PFM:NREP 12 GO:PFM GO:0005524|"GO:ATP binding"|PF01624|IPR007695| GO:PFM GO:0006298|"GO:mismatch repair"|PF01624|IPR007695| GO:PFM GO:0030983|"GO:mismatched DNA binding"|PF01624|IPR007695| GO:PFM GO:0005524|"GO:ATP binding"|PF05188|IPR007860| GO:PFM GO:0006298|"GO:mismatch repair"|PF05188|IPR007860| GO:PFM GO:0030983|"GO:mismatched DNA binding"|PF05188|IPR007860| GO:PFM GO:0005524|"GO:ATP binding"|PF05192|IPR007696| GO:PFM GO:0006298|"GO:mismatch repair"|PF05192|IPR007696| GO:PFM GO:0030983|"GO:mismatched DNA binding"|PF05192|IPR007696| GO:PFM GO:0005524|"GO:ATP binding"|PF00488|IPR000432| GO:PFM GO:0006298|"GO:mismatch repair"|PF00488|IPR000432| GO:PFM GO:0030983|"GO:mismatched DNA binding"|PF00488|IPR000432| RP:SCP:NREP 4 RP:SCP:REP 40->152|1e3mA4|2e-49|68.1|113/115|d.75.2.1| RP:SCP:REP 153->304|1e3mA3|4e-35|32.7|147/153|c.55.6.1| RP:SCP:REP 307->605|1e3mA1|1e-95|50.8|297/297|a.113.1.1| RP:SCP:REP 725->827|2v4jC1|1e-29|14.6|96/103|d.203.1.1| HM:SCP:REP 38->152|1e3mA4|5.2e-45|53.0|115/115|d.75.2.1|1/1|DNA repair protein MutS, domain I| HM:SCP:REP 153->306|1e3mA3|5.1e-37|39.6|149/0|c.55.6.1|1/1|DNA repair protein MutS, domain II| HM:SCP:REP 307->605|1e3mA1|5.2e-88|44.4|297/297|a.113.1.1|1/1|DNA repair protein MutS, domain III| HM:SCP:REP 606->842|1e3mA2|2.1e-63|36.3|234/234|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 2577 OP:NHOMOORG 991 OP:PATTERN ------------------------22222222-----------1111111111----------1---- 423-------------------------------------2-----------------------------------------12122-443413333112332228242311111111111111122222221222244211113321221122222111211222222212112222122122212222122233333233333333333222233322233232222223333333333333333323333322233223332222332222212222222222222122222222222222222222222232222222224454554555535454443445443222332233332323222342232222111111111111111111111111111111111-131111111111111111111111111111111111111111111111221111111211111111111111111111111111-11111111111111111111111111111111111111--111111-11121111111211111111111222111211112122222221222222222322334111-------------------1-11-331111111111111111111111111111111-1211211-11121111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--11111111111211111111111111-111111121111111111111111-1111111111111111111111111111111111111111111111--1122222222221212212-------------------------3332333213111 3322666-A4525556656466655466666655566676666665656655664666666645346426664446637766666644-6C666666565756665279595957575544555673B3wv8-7694444645634543564475764538F46573343545967569*88877A56E69F7675564 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 861 STR:RPRED 94.0 SQ:SECSTR ########################################ccGcGGGccHHHHHHHHHTcTTcEEEEEcTTEEEEEHHHHHHHHHHHTcccEEEccTTccccEEEEEEGGGHHHHHHHHHHTTccEEEEEEcccGGGccccccEEEEEEEcTTTcccTTTccTTccccEEEEEEccccEEcccEEEEEEcTTTccEEEEccccHHHHHHHHHHcccEEEEETTcccGGTTTcTEEEcGGGGcHHHHHHHHHHHHTccccGGGTcTTcHHHHHHHHHHHHHHHHHHccccTTccccccEccGGGccEcHHHHHHHTccccTTcccTTcHHHHHcccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHTGTTHHHHHHHHHTTccHHHHHHHHHHTcccHHHHHHHHHHHTTHHHHHHHHHTHccccHHHHHHHHHcccHHHHHHHHHHcccccccccTTcccccTTccHHHHHHHHHHTcHHHHHHHHHHHHHHHHTcTTcEEEEETTTEEEEEEEHHHHTTccTTcEEEEEcccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccEEcccccEEEEEEccTTTTTcEHHcccccccEEEEEcccTccEccEEEEccTccHHHHHHHHHHHHHTTTccccccEEEEccccEEEEEEccHHHHHHHHHHcHHHHHHHHHHHHHHccTTcEEEEcccccccTTHHHHHHHHHHHHHHHTTccEEEEEcccGGGGGGGHHHHTTEEEEEEEEEEccccEEEEEEEEcccccccHHHHHHHTTccHHHHHHHHHHHHHHHHTc######TTHHHHHHHTTcccHHHHHHHHHHHHHHccHH##HHHHHHccGGGccHHHHHHHHHHHHTT####### DISOP:02AL 1-48,133-144,837-867,914-917| PSIPRED ccccccccccccccccccccccccccccccccccccccccccHHHccHHHHHHHHHHHHcccEEEEEEcccEEEEEHHHHHHHHHHHccEEcccccccccccccccccHHHHHHHHHHHHHcccEEEEEEEEccHHHcccccEEEEEEEEccEEEEEccccccccccEEEEEEEEcccccccEEEEEEEEccccEEEEEEEcHHHHHHHHHHccccEEEEcccccHHHHHHHHHcccHHHccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEccccEEEEcHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccHHHHHHHHHHHcccHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccEEEEEEcccHHHHccccEEEEEEccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEccccEEEEEEcccHHHHHHHccccccEEEcEEEEccccEEEEEEcccccHHHHHHHHHHHHHHHHHccccccccccEEccEEEEEEEEcccccHHccHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHccccEEEEEEEEEEEccEEEEEEEEEEccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcccccHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHccHHHHHHHHHHHHHHHHHHccc //