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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07962.1
DDBJ      :             protein of unknown function UPF0150
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  71/915 : Eukaryota  1/199 : Viruses  2/175   --->[See Alignment]
a.43.1d.304.1
:145 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   16->68 2dsyB PDBj 3e-11 26.4 %
:RPS:PDB   104->141 1ea4B PDBj 2e-07 15.8 %
:RPS:SCOP  26->78 2dsyA1  d.304.1.2 * 5e-10 32.7 %
:RPS:SCOP  104->142 1b01A  a.43.1.3 * 1e-05 15.4 %
:HMM:SCOP  12->71 1wv8A1 d.304.1.1 * 1.5e-11 36.7 %
:RPS:PFM   14->58 PF03681 * UPF0150 1e-07 40.0 %
:HMM:PFM   14->58 PF03681 * UPF0150 2e-19 46.7 45/48  
:HMM:PFM   105->138 PF01402 * RHH_1 0.0005 23.5 34/39  
:BLT:SWISS 12->141 YO14_BPHP1 7e-25 43.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07962.1 GT:GENE ABF07962.1 GT:PRODUCT protein of unknown function UPF0150 GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(1169790..1170227) GB:FROM 1169790 GB:TO 1170227 GB:DIRECTION - GB:PRODUCT protein of unknown function UPF0150 GB:PROTEIN_ID ABF07962.1 GB:DB_XREF GI:93353873 InterPro:IPR005357 LENGTH 145 SQ:AASEQ MSGAPCTKRNDMDFPIAIHKDANSVYGVTVPDVAGCYSAGESIEEAVRNAREAITTHVVALLSLGEEVVLKTTPIGTLMAQPEYADAIWALADIDMSKLDARPERINISLPRFVLHKIDMFVERRHETRSGFLARVALDAIAGSV GT:EXON 1|1-145:0| BL:SWS:NREP 1 BL:SWS:REP 12->141|YO14_BPHP1|7e-25|43.0|128/133| RP:PDB:NREP 2 RP:PDB:REP 16->68|2dsyB|3e-11|26.4|53/75| RP:PDB:REP 104->141|1ea4B|2e-07|15.8|38/41| RP:PFM:NREP 1 RP:PFM:REP 14->58|PF03681|1e-07|40.0|45/48|UPF0150| HM:PFM:NREP 2 HM:PFM:REP 14->58|PF03681|2e-19|46.7|45/48|UPF0150| HM:PFM:REP 105->138|PF01402|0.0005|23.5|34/39|RHH_1| RP:SCP:NREP 2 RP:SCP:REP 26->78|2dsyA1|5e-10|32.7|49/80|d.304.1.2| RP:SCP:REP 104->142|1b01A|1e-05|15.4|39/43|a.43.1.3| HM:SCP:REP 12->71|1wv8A1|1.5e-11|36.7|60/0|d.304.1.1|1/1|TTHA1013-like| OP:NHOMO 92 OP:NHOMOORG 74 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------1-------1----1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11--1---1----1-----1-------------1--------1-------------1--------1-2-------------111------------------------------------1----21-1------------1-11---1--1---1-----------1-------------12--------1-----------1-111-------1-------------------------------------------1--------------------------2--1--------1---1-----------1-----------1----------1321----------------1---------122212212211---------1-----------------1--11---11----------1-2-23------1--------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- -----------------11------------------------------------------------------------------------------------------------------------------------------------------------------------ STR:NPRED 93 STR:RPRED 64.1 SQ:SECSTR ###############EEEEccccccEEEEcTTcTTcEEEEccHHHHHHHHHHHHHHHHHHHHHTTccc###################################ccccccccHHHHHHHHHHHHHTTccHHHHHHHHHHHHcTc## DISOP:02AL 1-6,8-8,145-146| PSIPRED ccccccccccccEEEEEEEEcccccEEEEEcccccHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHccHHHcccEEEEEEccHHHHccccEEEEEEccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccc //