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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07965.1
DDBJ      :             RNA methyltransferase TrmH, group 1
Swiss-Prot:             

Homologs  Archaea  42/68 : Bacteria  463/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
c.116.1e.26.1
:289 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   27->278 3ilkB PDBj 2e-31 39.5 %
:RPS:PDB   28->190 3dcmX PDBj 2e-21 10.6 %
:RPS:SCOP  25->134 1mjgM  e.26.1.3 * 2e-21 15.1 %
:HMM:SCOP  6->229 1v2xA_ c.116.1.1 * 9.8e-29 28.3 %
:RPS:PFM   30->187 PF00588 * SpoU_methylase 8e-07 35.8 %
:HMM:PFM   28->187 PF00588 * SpoU_methylase 1.9e-28 34.3 137/142  
:BLT:SWISS 27->280 TRMJ_ERWCT 8e-47 48.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07965.1 GT:GENE ABF07965.1 GT:PRODUCT RNA methyltransferase TrmH, group 1 GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1171656..1172525 GB:FROM 1171656 GB:TO 1172525 GB:DIRECTION + GB:PRODUCT RNA methyltransferase TrmH, group 1 GB:PROTEIN_ID ABF07965.1 GB:DB_XREF GI:93353876 InterPro:IPR001537 InterPro:IPR004384 LENGTH 289 SQ:AASEQ MTEVLNSQMDPIPRGAAASDLSDIFAHVRVVLVETSHPGNVGSVARAIKTMGFGHVPGSLVLVSPREPGVVSHPDAVAMASGADDVLASATIVDSIEAALAGTAFTVAMTARQREFGPPRLLPRAAVAKARSVLEADPATTVAFVFGNERFGLPNDAVLRCSAVTHIPANPVYASLNLAQAVQLIAYEMRLALLEAQETAGGLPDVAGDIGYAGDPATTEQIEAMFGHLQAGLAAIGFLDPANPRKLMPRLRRLFARTGLEREEVNILRGIAKRMLLTGDAKHDDNKED GT:EXON 1|1-289:0| BL:SWS:NREP 1 BL:SWS:REP 27->280|TRMJ_ERWCT|8e-47|48.3|236/241| BL:PDB:NREP 1 BL:PDB:REP 27->278|3ilkB|2e-31|39.5|220/226| RP:PDB:NREP 1 RP:PDB:REP 28->190|3dcmX|2e-21|10.6|161/188| RP:PFM:NREP 1 RP:PFM:REP 30->187|PF00588|8e-07|35.8|137/143|SpoU_methylase| HM:PFM:NREP 1 HM:PFM:REP 28->187|PF00588|1.9e-28|34.3|137/142|SpoU_methylase| GO:PFM:NREP 3 GO:PFM GO:0003723|"GO:RNA binding"|PF00588|IPR001537| GO:PFM GO:0006396|"GO:RNA processing"|PF00588|IPR001537| GO:PFM GO:0008173|"GO:RNA methyltransferase activity"|PF00588|IPR001537| RP:SCP:NREP 1 RP:SCP:REP 25->134|1mjgM|2e-21|15.1|106/728|e.26.1.3| HM:SCP:REP 6->229|1v2xA_|9.8e-29|28.3|187/191|c.116.1.1|1/1|alpha/beta knot| OP:NHOMO 531 OP:NHOMOORG 510 OP:PATTERN 111-11--1111111-1------1111111111--11-1----1111111111----1111-11---- 111-------------------------------------------------------------------------------------------------------------------------------------1---------211111111111-1--111111111-1111--1-11-11111--1----------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------11-111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111------------111111111-11-----11111111111111111111111111111111111111111111111111111111111111111111111111111-121-111111111-11111111122212-11-------------------------11221121111112111111111111111111---1111------12222111111111111-1111111111111111111111221111111111111111111211111111-111111111111--1111111111112122111111111-111111111111111111111111111111111111111111111111111111111111111111111111111-------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-1----1--------1----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 250 STR:RPRED 86.5 SQ:SECSTR ####################ccGGGGGTccEEcccccHHHHHHHHHHHHHTTccEEEEEcccHHHHHHHHHHTcGGGGTccccHHHHTTEEEEccHHHHHHHHHHHHccccEEEEcccccccccccHHHHHHccHHHHccccEEEEEccTTcccHHHHTTccEcccTTTTcccccccHHHHHHHHHHHHTHHTTTTTTc####HHHHHHTTcccccccHHHHHHHHHHHHHHHHHTTccccHHHHH####HHHHHHHHTccHHHHHHHHHHHHHHHTT########### DISOP:02AL 1-2,6-23,194-215,277-290| PSIPRED ccHHHHccccccccccccccHHHHHccEEEEEEccccccHHHHHHHHHHHccccccccEEEEEccccccccccHHHHHHHccccccccEEEEEccHHHHHHcccEEEEEEcccccccccccccHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHcccEEEEcccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccc //