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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07970.1
DDBJ      :             Tetratricopeptide TPR_2
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  59/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.118.8
:251 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   85->181 2fo7A PDBj 2e-07 29.9 %
:RPS:PDB   82->210 2c0mA PDBj 5e-14 14.7 %
:RPS:SCOP  83->202 1w3bA  a.118.8.1 * 5e-13 24.2 %
:HMM:SCOP  60->206 1a17A_ a.118.8.1 * 2.2e-20 25.2 %
:HMM:PFM   103->134 PF07719 * TPR_2 9.4e-05 28.1 32/34  
:HMM:PFM   138->170 PF07719 * TPR_2 5.9e-06 36.4 33/34  
:BLT:SWISS 85->204 SPY_HORVU 4e-07 30.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07970.1 GT:GENE ABF07970.1 GT:PRODUCT Tetratricopeptide TPR_2 GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(1175751..1176506) GB:FROM 1175751 GB:TO 1176506 GB:DIRECTION - GB:PRODUCT Tetratricopeptide TPR_2 GB:PROTEIN_ID ABF07970.1 GB:DB_XREF GI:93353881 InterPro:IPR013026 InterPro:IPR013105 LENGTH 251 SQ:AASEQ MPRSITDRPYMSLPLPIPTIVSSRRGGPLSALASALAMAAALSAAPAFAQNGPLSLTPPPAAPTGPQSADPGMKPAQKAANEKRYDDAIAGFDRVLADNPRNAQARFQRAWAMAKAGREDDAIKAFAEMAQDFPELPEPHNNLALLYAKRGDLKRAEAELLLAIEARPDYALSYSNLGDVYRALAVQAYGDATRRNPGDKRAAASLRELQPAAASAPSAMPAPASGAAAVKGKAKAATSPVTPPASTPDAR GT:EXON 1|1-251:0| BL:SWS:NREP 1 BL:SWS:REP 85->204|SPY_HORVU|4e-07|30.0|120/944| SEG 29->49|lsalasalamaaalsaapafa| SEG 52->68|gplsltpppaaptgpqs| SEG 156->166|aeaelllaiea| SEG 212->248|aaasapsampapasgaaavkgkakaatspvtppastp| BL:PDB:NREP 1 BL:PDB:REP 85->181|2fo7A|2e-07|29.9|97/136| RP:PDB:NREP 1 RP:PDB:REP 82->210|2c0mA|5e-14|14.7|129/297| HM:PFM:NREP 2 HM:PFM:REP 103->134|PF07719|9.4e-05|28.1|32/34|TPR_2| HM:PFM:REP 138->170|PF07719|5.9e-06|36.4|33/34|TPR_2| RP:SCP:NREP 1 RP:SCP:REP 83->202|1w3bA|5e-13|24.2|120/388|a.118.8.1| HM:SCP:REP 60->206|1a17A_|2.2e-20|25.2|147/0|a.118.8.1|1/1|TPR-like| OP:NHOMO 62 OP:NHOMOORG 59 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2------------------------------------------------------------------------------------11111111111111111111111111111111111111--1112111211111111-----------1-11-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 139 STR:RPRED 55.4 SQ:SECSTR ########################################################################HHHHHHHHHHTcHHHHHHHHHHHHTTcTTcHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHcTTcHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHTcccTTTccccccHHHHHHHHTcGGGHHHHHHTcHHHHHHHTT######################################## DISOP:02AL 1-5,218-228,230-231,233-233,238-252| PSIPRED cccccccccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHcHHHHcccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccccccccHHHccccccccccccccccccccc //