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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF07992.1
DDBJ      :             PepSY-associated TM helix
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  92/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:542 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   143->179 PF03929 * PepSY_TM 4.5e-09 38.5 26/27  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF07992.1 GT:GENE ABF07992.1 GT:PRODUCT PepSY-associated TM helix GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1204074..1205702 GB:FROM 1204074 GB:TO 1205702 GB:DIRECTION + GB:PRODUCT PepSY-associated TM helix GB:PROTEIN_ID ABF07992.1 GB:DB_XREF GI:93353903 InterPro:IPR005625 LENGTH 542 SQ:AASEQ MAELKKGQGLRQSMAWLHTWSGLLVCWVLFLVFCGGTASYVKDEISLWMKPELHASWEGDVSAADVAQRAYAYLQREAPGAERWFINLPDARRPAISVFWLRKPGPADAGKGNRARLESRTLDARTGMPIPGARDTRGGEFLYRLHFDLHYIPAVQARWIVGICAMFMLVAIISGVITHRRIFTDFFTFRPRKGPRSWLDAHNAMAVLALPFHLMITYTGLVTLLFMYMPWGIQAVYKGDEKAFTAELAARAPRVKAANEAAVLAPIAPMVEQAMARWHGTPPQRIAVEQPSNANATVSLTRAESRDIGTTLPVMVFSGATGVVQAALGESVAAASATRSTMVGLHVAHFAPPLLRALFFVSGLAGALMVATGALLWAVKTRQSHAKRIAAIGRVPSGLRLVEALNLGVIAGLPIAFAAYFWANRLLPADMAQRSGMEIRAFFSAWAVAALLAQWKPTREMWRVLLWTGAGLFAGLPVLNAITTTSHLGVTLRHGPIAVAGFDLTVLAIGIGIGAAAWMLGKRGPEKRAAPAVRHRAAEVSP GT:EXON 1|1-542:0| TM:NTM 8 TM:REGION 18->40| TM:REGION 157->179| TM:REGION 205->227| TM:REGION 310->332| TM:REGION 351->373| TM:REGION 401->423| TM:REGION 461->483| TM:REGION 498->520| SEG 23->34|llvcwvlflvfc| SEG 326->337|aalgesvaaasa| SEG 508->517|aigigigaaa| HM:PFM:NREP 1 HM:PFM:REP 143->179|PF03929|4.5e-09|38.5|26/27|PepSY_TM| OP:NHOMO 142 OP:NHOMOORG 95 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------1-----1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------1-111-1-------------11-11-12--------------------------11------------1111-1----------------------------------1-221-1------------------------2-32----1--2114----1-1----1---------2----------------------------------------------------------------------1111-1233212112221113212--------------------------------------------------------------------------------------------------------------1------------------22222-1---2211111111-1212-1--------------------------241313322---------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-8,106-115,247-265,388-388,531-531,534-535,537-543| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEcccccccEEEEEEEcccccccccccccccEEEEEEccccccccHHHHHcHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHccccccEEEEEEcccccEEEEEEEEccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHcccc //