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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08002.1
DDBJ      :             ornithine cyclodeaminase
Swiss-Prot:             

Homologs  Archaea  16/68 : Bacteria  130/915 : Eukaryota  39/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:355 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   42->352 1vllA PDBj 3e-32 30.7 %
:RPS:SCOP  61->355 1u7hA  c.2.1.13 * 5e-51 24.8 %
:HMM:SCOP  18->354 1x7dA_ c.2.1.13 * 5.2e-81 36.0 %
:RPS:PFM   45->343 PF02423 * OCD_Mu_crystall 1e-31 34.5 %
:HMM:PFM   42->346 PF02423 * OCD_Mu_crystall 2.8e-60 33.2 289/314  
:BLT:SWISS 58->350 OCD2_RHIME 4e-27 29.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08002.1 GT:GENE ABF08002.1 GT:PRODUCT ornithine cyclodeaminase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(1217577..1218644) GB:FROM 1217577 GB:TO 1218644 GB:DIRECTION - GB:PRODUCT ornithine cyclodeaminase GB:PROTEIN_ID ABF08002.1 GB:DB_XREF GI:93353913 InterPro:IPR003462 LENGTH 355 SQ:AASEQ MTNSPTLTATTLPSASNPSHTKPELRYLSRDDLIALGAGHSDAFVQAITEGLAIHARGEHVQPLKPYLRWSGADHIADRIIAMPCYIGGDNPIAGIKWIGSRQHNPARFGLERASAVIVLNDATTNYPVAIMEGGLISGMRTAAITAVATRHLARSGFTDVACIGCGPIAQMQMQTLLEQFPQIRAVHLFDLSRDAMHAMRSMLGSRFPAVGWELCGSAELAVRAADVVVTCTVTDTPYLEHAWLKTGAFVCNVSIMDVHKDVYEKVDKVIVDDWDQSNREKKIINQLVLEGRFSREQLHAELGEIVIGRKPGRERDDEIILLNPMGMALDDMVCARHFYHLALERNAGTRLPLL GT:EXON 1|1-355:0| BL:SWS:NREP 1 BL:SWS:REP 58->350|OCD2_RHIME|4e-27|29.6|277/330| SEG 227->237|dvvvtctvtdt| BL:PDB:NREP 1 BL:PDB:REP 42->352|1vllA|3e-32|30.7|296/321| RP:PFM:NREP 1 RP:PFM:REP 45->343|PF02423|1e-31|34.5|281/304|OCD_Mu_crystall| HM:PFM:NREP 1 HM:PFM:REP 42->346|PF02423|2.8e-60|33.2|289/314|OCD_Mu_crystall| RP:SCP:NREP 1 RP:SCP:REP 61->355|1u7hA|5e-51|24.8|282/341|c.2.1.13| HM:SCP:REP 18->354|1x7dA_|5.2e-81|36.0|314/0|c.2.1.13|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 238 OP:NHOMOORG 185 OP:PATTERN ----------------11-----12--1-1-1--1------------111111-------1---1--- 1-1----2111--1---------------------------------1------------1--1--23-2-----------11-----------------------------------------------------1----11-1--------------------------------------1----------111111111111111------111--2----------32-11111111111111-11--2---11------------1------1-------------------------------------------------11111-1-1--1---------------------------------1--------------------1-------------1------2--12--1---1-3211-1---1--1-------1------------------------------------------------3--1----------1-------------------11----11------3--1--1----------------1-1----------------------1-----21---------------------------------------1-----1-1----1-1--1--------------111---1-------------------------------------------------------------------------------------1111----4-----------------------11------1--1--1---1111-1--111---------------1------------------------------------------------------------------------- -------------------------------------------------1------------------------------------------------------------2-2-1--111--1-1-111332-11111-111111-1---1--1-1112----2-1-------11---1K------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 301 STR:RPRED 84.8 SQ:SECSTR #########################################HHHHHHHHHHHHHHHTTcccccccEEEEETTEE#####EEEEEEEETT###EEEEEEEEEcTTHHHH#TcccccEEEEEEcTTTccEEEEEEcHHHHHHHHHHHHHHHHHHHccTTccEEEEEcccHHHHHHHHHHTTTc#cccEEEEEcccHHHHHHHHHHHHTTTcEEEEcEcccHHHHTccccEEEEccccccccccGGGccTTcEEEEcccccTTcccccHTEEEEEccHHHHHHTcTTcHHHHHTTcccGGGEEEEHHHHHTTccccccccccEEEEEccccHHHHHHHHHHHHHHHHHTTccEEE### DISOP:02AL 1-5,8-8| PSIPRED cccccccccEEcccccccccccccEEEEcHHHHHHHHcccHHHHHHHHHHHHHHHHcccEEccccEEEEcccccccccEEEEEcccccccccEEEEEEEEEcccccccccccEEEEEEEEEEcccccEEEEEEccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHcccccccEEEEEccHHHHHHcccEEEEEEEcccccccHHHcccccEEEEcccccccHHHHHHcccEEEEcHHHHHHHHHHHHHHHHcccccHHHccccHHHHHcccccccccccccEEEEccccHHHHHHHHHHHHHHHHHcccccccccc //