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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08046.1
DDBJ      :             threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase
Swiss-Prot:SYT_CUPTR    RecName: Full=Threonyl-tRNA synthetase;         EC=6.1.1.3;AltName: Full=Threonine--tRNA ligase;         Short=ThrRS;

Homologs  Archaea  68/68 : Bacteria  908/915 : Eukaryota  195/199 : Viruses  0/175   --->[See Alignment]
c.116.1c.51.1d.104.1d.15.10d.67.1
:663 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   31->663 1qf6A PDBj 0.0 58.1 %
:RPS:PDB   94->547 2cjaB PDBj 1e-93 14.6 %
:RPS:SCOP  30->88 1nyqA2  d.15.10.1 * 1e-12 28.8 %
:RPS:SCOP  89->269 1nyqA3  d.67.1.1 * 1e-56 51.4 %
:RPS:SCOP  269->558 1evkA2  d.104.1.1 * e-133 64.1 %
:RPS:SCOP  537->657 1o6dA  c.116.1.3 * 2e-28 14.9 %
:HMM:SCOP  30->89 1qf6A2 d.15.10.1 * 2.4e-17 51.7 %
:HMM:SCOP  91->268 1qf6A3 d.67.1.1 * 1e-67 48.3 %
:HMM:SCOP  269->559 1evlA2 d.104.1.1 * 3.1e-107 36.8 %
:HMM:SCOP  556->661 1hc7A1 c.51.1.1 * 3.9e-30 40.0 %
:RPS:PFM   30->89 PF02824 * TGS 6e-05 35.0 %
:RPS:PFM   111->199 PF09766 * FimP 7e-04 29.1 %
:RPS:PFM   203->246 PF07973 * tRNA_SAD 7e-08 64.9 %
:RPS:PFM   302->462 PF00587 * tRNA-synt_2b 5e-20 36.2 %
:RPS:PFM   569->656 PF03129 * HGTP_anticodon 8e-09 28.4 %
:HMM:PFM   300->462 PF00587 * tRNA-synt_2b 9.6e-47 28.4 162/173  
:HMM:PFM   568->657 PF03129 * HGTP_anticodon 2.9e-21 33.3 90/94  
:HMM:PFM   199->246 PF07973 * tRNA_SAD 3.7e-17 41.5 41/44  
:HMM:PFM   30->89 PF02824 * TGS 7.3e-13 31.7 60/60  
:BLT:SWISS 29->663 SYT_CUPTR 0.0 93.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08046.1 GT:GENE ABF08046.1 GT:PRODUCT threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1269993..1271984 GB:FROM 1269993 GB:TO 1271984 GB:DIRECTION + GB:PRODUCT threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase GB:PROTEIN_ID ABF08046.1 GB:DB_XREF GI:93353957 InterPro:IPR002314 InterPro:IPR002320 InterPro:IPR004095 InterPro:IPR004154 InterPro:IPR006195 InterPro:IPR012947 LENGTH 663 SQ:AASEQ MGRRHKRSYAPLATSPEGRCSGILERCKMIVITLPDGSRREYPGPVTVAEVAQSIGSGLAKAALAGKVDGRMVDTSFRIDQDASLSIVTDKDADGVDVIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFSYKRPFTPEDLAAIEKKMTELARKDEKVSREVWNRDEAVALFESMGEKYKAEIIASIPADQEIGLYREGSFVDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSNNEMLQRIYGTAWAKKEDQDAYLHMLEEAEKRDHRRLGKTLDLFHLQEEAPGMVFWHPKGWQVWQAVEQYMRGRLGQAGYEEVRTPQVMDRSLWERSGHWDNYKENMFVTESEKRDYAIKPMNCPGHVQIFNHGLRSYRDLPLRLAEFGACHRNEPSGALHGLMRVRGFVQDDAHIFCTEEQIVEEAKAFNELAFSIYDDFGFKDVAVKLSLRPEKRAGSDAVWDHAEDGLRLALRACGVEWEELPGEGAFYGPKVEYHIKDAIGRSWQCGTLQLDLVLPERLGAEYVSEDNSRKRPVMLHRAILGSFERFLGILLENHAGALPAWLAPEQVVVMNIAESQSEYAENVVQLLQKQGFRAKADLRNEKITYKIREHSLQKIPYLLVIGDKERDANQVAVRARGNVDLGVMPVSAFVERLQQDVSSKA GT:EXON 1|1-663:0| SW:ID SYT_CUPTR SW:DE RecName: Full=Threonyl-tRNA synthetase; EC=6.1.1.3;AltName: Full=Threonine--tRNA ligase; Short=ThrRS; SW:GN Name=thrS; OrderedLocusNames=RALTA_A1260; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Metal-binding; Nucleotide-binding; Protein biosynthesis; Zinc. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 29->663|SYT_CUPTR|0.0|93.5|635/635| GO:SWS:NREP 7 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| SEG 58->67|glakaalagk| BL:PDB:NREP 1 BL:PDB:REP 31->663|1qf6A|0.0|58.1|633/641| RP:PDB:NREP 1 RP:PDB:REP 94->547|2cjaB|1e-93|14.6|426/476| RP:PFM:NREP 5 RP:PFM:REP 30->89|PF02824|6e-05|35.0|60/60|TGS| RP:PFM:REP 111->199|PF09766|7e-04|29.1|86/334|FimP| RP:PFM:REP 203->246|PF07973|7e-08|64.9|37/44|tRNA_SAD| RP:PFM:REP 302->462|PF00587|5e-20|36.2|160/170|tRNA-synt_2b| RP:PFM:REP 569->656|PF03129|8e-09|28.4|88/91|HGTP_anticodon| HM:PFM:NREP 4 HM:PFM:REP 300->462|PF00587|9.6e-47|28.4|162/173|tRNA-synt_2b| HM:PFM:REP 568->657|PF03129|2.9e-21|33.3|90/94|HGTP_anticodon| HM:PFM:REP 199->246|PF07973|3.7e-17|41.5|41/44|tRNA_SAD| HM:PFM:REP 30->89|PF02824|7.3e-13|31.7|60/60|TGS| GO:PFM:NREP 14 GO:PFM GO:0005524|"GO:ATP binding"|PF07973|IPR012947| GO:PFM GO:0005737|"GO:cytoplasm"|PF07973|IPR012947| GO:PFM GO:0006412|"GO:translation"|PF07973|IPR012947| GO:PFM GO:0016876|"GO:ligase activity, forming aminoacyl-tRNA and related compounds"|PF07973|IPR012947| GO:PFM GO:0043039|"GO:tRNA aminoacylation"|PF07973|IPR012947| GO:PFM GO:0000166|"GO:nucleotide binding"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00587|IPR002314| GO:PFM GO:0005524|"GO:ATP binding"|PF00587|IPR002314| GO:PFM GO:0005737|"GO:cytoplasm"|PF00587|IPR002314| GO:PFM GO:0006412|"GO:translation"|PF00587|IPR002314| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF03129|IPR004154| GO:PFM GO:0005524|"GO:ATP binding"|PF03129|IPR004154| GO:PFM GO:0006412|"GO:translation"|PF03129|IPR004154| RP:SCP:NREP 4 RP:SCP:REP 30->88|1nyqA2|1e-12|28.8|59/59|d.15.10.1| RP:SCP:REP 89->269|1nyqA3|1e-56|51.4|179/179|d.67.1.1| RP:SCP:REP 269->558|1evkA2|e-133|64.1|290/291|d.104.1.1| RP:SCP:REP 537->657|1o6dA|2e-28|14.9|121/147|c.116.1.3| HM:SCP:REP 30->89|1qf6A2|2.4e-17|51.7|60/0|d.15.10.1|1/1|TGS-like| HM:SCP:REP 91->268|1qf6A3|1e-67|48.3|178/179|d.67.1.1|1/1|ThrRS/AlaRS common domain| HM:SCP:REP 269->559|1evlA2|3.1e-107|36.8|291/0|d.104.1.1|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 556->661|1hc7A1|3.9e-30|40.0|105/127|c.51.1.1|1/1|Class II aaRS ABD-related| OP:NHOMO 2256 OP:NHOMOORG 1171 OP:PATTERN 11111111111111111111111111111111111111111111111111111111111111111111 1111322222222222222-22112222222222223212222223222222222223222222223232222222222122122222221111111--1111111111111111111111111211111111111111222221144222232222222222222133211221111211211111112211233333333333333322223233322231222111111222222222222222232232212211221112222112222221111111111122222222222221111111111111211111111133223111111121323112222223121113122322331223333222111222222222222322222222222222222222-22222222223122222222222222222222222222222222222222221222212222211222222222222222222321131222222122222122222221222222331222211222122222212222231212222222222222222211122222223322222121221221221211111111111111111111122212112223222222223333222222222222332-2222211111132222222222222222-22222222222222222222232222222222222222222222222222221222222222222112222222222212323222222222222222222222132322222223222222222221111111112111411111212112222222222222222211111221111111131111111-11111111111111111112222223222121 1111222-311122222222222322222222222122222222222222222212223222233333223123222-2322222322-1312111111111222212B324733643323333573639U3-66B3333933442334333494433324A11121311512322222F2222242452432262223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 636 STR:RPRED 95.9 SQ:SECSTR ###########################cEEEccccccTTccccEEETTEEEEEEEHHHHHHTccTTcccEEEEccGGccEEEEEEEEEEccccEEEEEEEcccccTTHHHHHHHHHHHHHTGccTTcccEEEEEEGGGTTEcccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEEEEEcccccccccccTTEEEEEETTEEEEEEcccHHHHTTHHHHHHHHHHHHHHHHHTTTcccccEEEEEccccccccccHHHHHTTcEEcTTcEEEcHHHHHHHHHHHHHHHHHTTTTTTcEEccccEEEHHHHHHHTGGGTcGGGccHHHHcccccEEcccccGGGGTTTTccEEcTTTccEEEEEccEEEccccccccccTTcccEEEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHTcccccEEEEccccEEEEEEEEEEccGGGcTTcGcTTcccEEEEEEEEcTTHHHHHTTcEETTccccEEEEEEEEHHHHHHHHHHHHcEcccccGGGccHHHHHHHcccccHHHHHHHHHcccGGGccHHHHHHHcccccHTcccGGGGcHHHHTTccccEEEcccccHHHHHHHHHHTTccEEEEEcHHHTTTTEEEEEETTTccEEEEEHHHHHHHHHHHHcTTc DISOP:02AL 1-6,8-8,19-19,663-664| PSIPRED cccccHHHHHHHHHcHHHHHHHHHccccccEEEEccccEEEEcccccHHHHHHHHcccHHHHHcccccccEEEEccEEcccccEEEEEEcccHHHHHHHcccHHHHHHHHHHHHccccEEEEEccccccEEEEEEccccccHHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHcccccEEEEEEcccccEEEEEEEccEEEEcccccccccccccEEEEEEEcHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHcccEEEccccEEcHHHHHHccccccccccEEEEEccccEEEEccccHHHHHHHHHcccccHHHccHHHHHcccEEEccccccccccEEccEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHcccccEEccccccccEEEEEEEEEEccccEEEEEEEEEcccccHHcccEEEcccccEEEEEEEEEccHHHHHHHHHHHHHHHccccccccccEEEEEEEccHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHccccEEEEEcccHHHccEEEEEEcccccEEEEEHHHHHHHHHHHHHHcc //