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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08051.1
DDBJ      :             phenylalanyl-tRNA synthetase beta subunit
Swiss-Prot:             

Homologs  Archaea  29/68 : Bacteria  891/915 : Eukaryota  69/199 : Viruses  0/175   --->[See Alignment]
a.6.1b.153.1b.40.4d.104.1d.58.13
:815 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->807 2rhqB PDBj e-100 33.9 %
:RPS:PDB   1->807 1b70B PDBj 0.0 34.4 %
:RPS:SCOP  45->208 1e7zA  b.40.4.4 * 2e-43 22.0 %
:RPS:SCOP  205->398 1b70B6  b.153.1.1 * 1e-44 35.2 %
:RPS:SCOP  408->484 1b70B2  a.6.1.1 * 2e-17 34.2 %
:RPS:SCOP  483->701 1b70B5  d.104.1.1 * 3e-50 32.8 %
:RPS:SCOP  708->807 1b70B4  d.58.13.1 * 3e-21 37.4 %
:HMM:SCOP  36->207 1ntgA_ b.40.4.4 * 1.9e-52 49.7 %
:HMM:SCOP  201->406 1pysB6 b.153.1.1 * 4.2e-71 45.9 %
:HMM:SCOP  407->485 1pysB2 a.6.1.1 * 7.5e-19 46.7 %
:HMM:SCOP  476->703 1pysB5 d.104.1.1 * 1.6e-51 37.3 %
:HMM:SCOP  706->814 1pysB4 d.58.13.1 * 3.6e-22 41.0 %
:RPS:PFM   46->151 PF01588 * tRNA_bind 1e-25 60.0 %
:RPS:PFM   222->389 PF03483 * B3_4 5e-42 51.5 %
:RPS:PFM   410->480 PF03484 * B5 2e-08 42.6 %
:RPS:PFM   712->814 PF03147 * FDX-ACB 4e-13 44.1 %
:HMM:PFM   220->392 PF03483 * B3_4 2.2e-66 46.2 173/174  
:HMM:PFM   46->153 PF01588 * tRNA_bind 1.5e-25 44.2 95/95  
:HMM:PFM   409->480 PF03484 * B5 6.2e-23 44.9 69/70  
:HMM:PFM   712->814 PF03147 * FDX-ACB 5.5e-23 43.6 94/94  
:BLT:SWISS 1->814 SYFB_RALEJ 0.0 89.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08051.1 GT:GENE ABF08051.1 GT:PRODUCT phenylalanyl-tRNA synthetase beta subunit GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1274622..1277069 GB:FROM 1274622 GB:TO 1277069 GB:DIRECTION + GB:PRODUCT phenylalanyl-tRNA synthetase beta subunit GB:PROTEIN_ID ABF08051.1 GB:DB_XREF GI:93353962 InterPro:IPR002547 InterPro:IPR004532 InterPro:IPR005121 InterPro:IPR005146 InterPro:IPR005147 LENGTH 815 SQ:AASEQ MQFSESWLRTFANPEKISTDALSHSLTMAGLEVEEVGPVAPPFTKIVVARVLATERHPNADRLNVCQVDAGTGETLQIVCGAPNVTPGIVVPCALVGAVLPPGEEGGKPFEIKVGKLRGVDSFGMLCSARELKLSEDHGGLLVLPDDAPVGQDIRQYLDLDDQVFTIKLTPNKADCLSIHGVAREVSALTGAALTLPDMSPVAVTIQDKLPVKISSPDLCGRFSGRIIRGVNARAATPAWMVQRLERSGQRSISALVDISNYVMLELGRPSHVFDLDKIHGGLDVRWGRKGEQLKLLNGNTVEVDEQVGVISDDKEIESLAGIMGGDSTAVSLDTTNIYLEAAFWWPNAIQGRARRYNFSTDAAHRFERGVDYATTVEHIERITALILDICGGQAGPVDDQTVNVPQRQPVKLRVARAERVLGIELSSAEIADVFQRLNLSFTRSQGDEGEVFEVTPPSYRFDIEIEEDLIEEVARIYGFERIPARPPVAESEMRPTNEGRRSQHVVRHALAARDFNEVINFAFVEEQWEQDFADNNNPIRLLNPIASQLAVMRSTMIGGLLDKVRYNLNRKASRVRLFEVGRVFHRDPKVVDGGLTVAGYHQPMMAAGIAYGPAFDEQWGVATRPVDFFDIKGDVEALFHPRVPRFEPVAHPALHPGRAARVIVDGKAVGVVGELHPRWLQKYELTQAPVLFELELDALRGVGLPVYTEISKFPAAVRDLAVVVKQSLRAQDMLDAMRAALDKGGFGHFVQSLVLFDEFRPKAASAAIGADEKSLAFRVTLQDTGSTLQDETVDSAVRCMIDALTAGFDARLRA GT:EXON 1|1-815:0| BL:SWS:NREP 1 BL:SWS:REP 1->814|SYFB_RALEJ|0.0|89.7|814/815| SEG 463->473|dieieedliee| BL:PDB:NREP 1 BL:PDB:REP 1->807|2rhqB|e-100|33.9|767/790| RP:PDB:NREP 1 RP:PDB:REP 1->807|1b70B|0.0|34.4|765/775| RP:PFM:NREP 4 RP:PFM:REP 46->151|PF01588|1e-25|60.0|95/100|tRNA_bind| RP:PFM:REP 222->389|PF03483|5e-42|51.5|167/172|B3_4| RP:PFM:REP 410->480|PF03484|2e-08|42.6|68/70|B5| RP:PFM:REP 712->814|PF03147|4e-13|44.1|93/94|FDX-ACB| HM:PFM:NREP 4 HM:PFM:REP 220->392|PF03483|2.2e-66|46.2|173/174|B3_4| HM:PFM:REP 46->153|PF01588|1.5e-25|44.2|95/95|tRNA_bind| HM:PFM:REP 409->480|PF03484|6.2e-23|44.9|69/70|B5| HM:PFM:REP 712->814|PF03147|5.5e-23|43.6|94/94|FDX-ACB| GO:PFM:NREP 15 GO:PFM GO:0000049|"GO:tRNA binding"|PF01588|IPR002547| GO:PFM GO:0003723|"GO:RNA binding"|PF03483|IPR005146| GO:PFM GO:0004826|"GO:phenylalanine-tRNA ligase activity"|PF03483|IPR005146| GO:PFM GO:0006412|"GO:translation"|PF03483|IPR005146| GO:PFM GO:0000287|"GO:magnesium ion binding"|PF03484|IPR005147| GO:PFM GO:0003723|"GO:RNA binding"|PF03484|IPR005147| GO:PFM GO:0005524|"GO:ATP binding"|PF03484|IPR005147| GO:PFM GO:0006412|"GO:translation"|PF03484|IPR005147| GO:PFM GO:0006432|"GO:phenylalanyl-tRNA aminoacylation"|PF03484|IPR005147| GO:PFM GO:0000049|"GO:tRNA binding"|PF03147|IPR005121| GO:PFM GO:0000287|"GO:magnesium ion binding"|PF03147|IPR005121| GO:PFM GO:0004826|"GO:phenylalanine-tRNA ligase activity"|PF03147|IPR005121| GO:PFM GO:0005524|"GO:ATP binding"|PF03147|IPR005121| GO:PFM GO:0006432|"GO:phenylalanyl-tRNA aminoacylation"|PF03147|IPR005121| GO:PFM GO:0008033|"GO:tRNA processing"|PF03147|IPR005121| RP:SCP:NREP 5 RP:SCP:REP 45->208|1e7zA|2e-43|22.0|150/173|b.40.4.4| RP:SCP:REP 205->398|1b70B6|1e-44|35.2|193/209|b.153.1.1| RP:SCP:REP 408->484|1b70B2|2e-17|34.2|73/75|a.6.1.1| RP:SCP:REP 483->701|1b70B5|3e-50|32.8|201/207|d.104.1.1| RP:SCP:REP 708->807|1b70B4|3e-21|37.4|91/94|d.58.13.1| HM:SCP:REP 36->207|1ntgA_|1.9e-52|49.7|161/0|b.40.4.4|1/1|Nucleic acid-binding proteins| HM:SCP:REP 201->406|1pysB6|4.2e-71|45.9|205/209|b.153.1.1|1/1|PheT/TilS domain| HM:SCP:REP 407->485|1pysB2|7.5e-19|46.7|75/75|a.6.1.1|1/1|Putative DNA-binding domain| HM:SCP:REP 476->703|1pysB5|1.6e-51|37.3|204/207|d.104.1.1|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 706->814|1pysB4|3.6e-22|41.0|100/104|d.58.13.1|1/1|Anticodon-binding domain of PheRS| OP:NHOMO 1142 OP:NHOMOORG 989 OP:PATTERN 111----1----11---------1111-1111--1111----------11111--11111------1- 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111--1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112222222222222222222222222222222222222221122222222222222222222222222222222222222222222222222222222222222222221222222222222222222222211111111111111111111111111111111111121111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111-111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111----------111112-1121111----212--1121111111111111 ----------------1---111111111----1---1----1------------------------1-1-1---------------1----1----------1-1----22-11111--1-1-1111-191-1111---1-1---1---1--1-111-114-21--111---12-1111-----2--2--1--1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 813 STR:RPRED 99.8 SQ:SECSTR cEEEHHHHHTTccTTcccHHHHHHHHHHHTccEEEEEEcccccTTEEEEEEEEEEEETTcTTEEEEEEEcccccEEEEEEccccccTTcEEEEEcTTccccccccccTccccccEEccccEEccEEccHHHHTccccccccccccTTcccTTccGGGTccccEEEEEcccTTcGGGGcHHHHHHHHHHTTccccccccccccEEccccccEEEEccTTTccEEEEEEEEccccccHccHHHHHHHHHTTcccccHHHHHHHHHHHHccccEEEEEGGGTcTEEEEEEccTTcEEEcTTccEEEccTTcEEEEEEETTEEETTTEEcTTTcccTTccEEEEEEEEccHHHHHHHHHHTTcccHHHHHHHHcccTTcHHHHHHHHHHHHHHHTccEEEcccEEEccccccccEEEcHHHHHHHHTccccHHHHHHHHHHTTcEEEcEcEcccccEEEEccTTccccccHHHHHHHHHHHHcGGGcccccccccGGGccTTHHHHHHHHHHHHHHHHTcEEcccccEEcTTHHHHTTcccccccccccccGGGcEEccccHHHHHHHHHHHHHHcccccEEEEEEEEEcccEEEEEEEEcEEcccEEEEEEEEEEcTTcccccccccEEccHHHHHHHHHHHHHHcccEEEccccTTccTTcccEEEETTEEEEEEEEccHHHHHHTTccccEEEEEEEEcccccccccccccccccccEEEEEcccEEccccHHHHHHHHHHHHHHHHccTTEEEEEEEEccccTT#cTTccTTEEccEEEEEEccccccccHHHHHHHHHHHHHHHHTHcccEEc# PSIPRED ccccHHHHHHHcccccccHHHHHHHHHHcccccccccccccccccEEEEEEEEEEEcccccEEEEEEEEcccccEEEEEccccccccccEEEEEEcccccccccEEEEEEEEEEcccccHHHHHHHHcHHHcccccccccEEEccccccccccccccccccccEEEEEccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEcccccccEEEEEEEEccccccccHHHHHHHHHHccccccccEEEHHHHHHHHHccccccEEHHHHcccEEEEEcccccEEEEcccEEEEcccccEEEEcccccEEEccccccccccccccccEEEEEEEcccHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccEEEEEEEEEcccccccEEEEEHHHHHHHHcccccHHHHHHHHHHcccEEEEEEcccccEEEEEccccccccEEcHHHHHHHHHHHcHHHccccccccccccccccHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEcccccccccccccccccEEEEEEEEEccccccccccccccEEHHHHHHHHHHHHHHHccEEEEccccccccccEEEEEEccEEEEEEEEEcHHHHHHccccccEEEEEEEHHHHHcccccccccccccccccccEEEEEcccccHHHHHHHHHHHHcccccccEEEEEEEEEEEEccccccccccccEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHcEEEcc //