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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08060.1
DDBJ      :             periplasmic sensor signal transduction histidine kinase
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  794/915 : Eukaryota  88/199 : Viruses  0/175   --->[See Alignment]
a.274.1a.30.2d.122.1d.131.1
:504 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   262->483 2c2aA PDBj 2e-18 28.8 %
:RPS:PDB   41->153 3e4oA PDBj 2e-05 10.6 %
:RPS:PDB   196->258 2aswA PDBj 2e-04 20.0 %
:RPS:PDB   262->488 3d36B PDBj 1e-26 22.0 %
:RPS:SCOP  196->258 2aswA1  a.274.1.1 * 6e-05 20.0 %
:RPS:SCOP  247->336 2c2aA1  a.30.2.1 * 1e-12 31.3 %
:RPS:SCOP  323->432 1vpkA1  d.131.1.1 * 2e-16 10.9 %
:HMM:SCOP  250->338 2c2aA1 a.30.2.1 * 1.8e-17 36.0 %
:HMM:SCOP  325->499 1jm6A2 d.122.1.4 * 4.6e-34 35.8 %
:RPS:PFM   387->488 PF02518 * HATPase_c 7e-11 38.0 %
:HMM:PFM   387->487 PF02518 * HATPase_c 4.8e-22 31.7 101/111  
:HMM:PFM   269->336 PF00512 * HisKA 5.3e-16 34.3 67/68  
:HMM:PFM   175->256 PF00672 * HAMP 5.5e-15 39.7 68/70  
:BLT:SWISS 225->439 SASA_SYNJA 2e-23 36.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08060.1 GT:GENE ABF08060.1 GT:PRODUCT periplasmic sensor signal transduction histidine kinase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1284914..1286428 GB:FROM 1284914 GB:TO 1286428 GB:DIRECTION + GB:PRODUCT periplasmic sensor signal transduction histidine kinase GB:PROTEIN_ID ABF08060.1 GB:DB_XREF GI:93353971 InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR005467 LENGTH 504 SQ:AASEQ MNLSLTQRLSAVFAALLLACCGASAWLQVRANAMHEKEVVQDISRGLAAYIARNALLEDQSAIAPQALRQLFGQLMVVNPSVEVYLLDDQGRIRGHDAPAGHLVRDHVNLAPVKKLIDGGALPIFGDDPRSDSGRKVFSAAPLRQGGYIYVVLQGEAHDKLAALASRDAVMRTTLWSMALVAALGLVAGLVAFGLITRPLRRLTLEIRQFDSGDAGDLRRSGIPGAGAADRIQEPMQRDEIAALRTAFRQMADRIETQWRALKQQDQERREMVANISHDLRTPLTSLHGYLETLSLKADKLSAEERQRYLAIALAQSAKVGGLAQSLFELARLEHGMVQAMPETFSIVDLTQDVLEKFALPAEAKHLQLRAGVPPVLPAVTADLGMIERVLTNLLDNAIRHTPVGGTVEVDLTSQNGSVAVTVSDTGPGIPPALRESLFQRPFPSGGAHRGGGLGLLIVQRMLQLNGSQARLVEGQVGTTLRFVLPVAGRESRPAAIADAAATR GT:EXON 1|1-504:0| BL:SWS:NREP 1 BL:SWS:REP 225->439|SASA_SYNJA|2e-23|36.2|213/377| TM:NTM 2 TM:REGION 5->26| TM:REGION 172->194| SEG 9->27|lsavfaalllaccgasawl| SEG 179->195|alvaalglvaglvafgl| SEG 446->457|ggahrggglgll| SEG 495->502|aaiadaaa| BL:PDB:NREP 1 BL:PDB:REP 262->483|2c2aA|2e-18|28.8|215/240| RP:PDB:NREP 3 RP:PDB:REP 41->153|3e4oA|2e-05|10.6|113/250| RP:PDB:REP 196->258|2aswA|2e-04|20.0|50/56| RP:PDB:REP 262->488|3d36B|1e-26|22.0|218/221| RP:PFM:NREP 1 RP:PFM:REP 387->488|PF02518|7e-11|38.0|100/112|HATPase_c| HM:PFM:NREP 3 HM:PFM:REP 387->487|PF02518|4.8e-22|31.7|101/111|HATPase_c| HM:PFM:REP 269->336|PF00512|5.3e-16|34.3|67/68|HisKA| HM:PFM:REP 175->256|PF00672|5.5e-15|39.7|68/70|HAMP| GO:PFM:NREP 1 GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 3 RP:SCP:REP 196->258|2aswA1|6e-05|20.0|50/54|a.274.1.1| RP:SCP:REP 247->336|2c2aA1|1e-12|31.3|83/89|a.30.2.1| RP:SCP:REP 323->432|1vpkA1|2e-16|10.9|110/120|d.131.1.1| HM:SCP:REP 250->338|2c2aA1|1.8e-17|36.0|89/0|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 325->499|1jm6A2|4.6e-34|35.8|173/190|d.122.1.4|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 9117 OP:NHOMOORG 904 OP:PATTERN -----------------------13--1-2-2--1--12222413-167GE39--------------1 7HS4K35566653488855-5D4479444445C8994B6868A656545762788456--96O3H4BEEI7333353322F64-1122NMcH-S12---749379P9QOR---------------32294424264aZWSPD59f2mSagRQBFG99122444HOBRtr*B232132242122GD522333BBCLLMLMIKMGMLNMNJDCBA89MNQ9DEK5LH988878eW5665655555666555344454744544445663366445455454666444433333333333333222222222322231111111155SEHiLLKNMOLKKFEPPO7CBBLEG42ABEC3VRF88535656573--4H9FTRRI25335EBOJJE8BHGIHC7777777778B-HIPHJOHOCHL4KGGLHHHKMIECCF99F75588697I96666666666545ZJG11-11-----11-1--1-------1-----5AA3368648NKLJOMHCDDAOOPWHHHI9FRORGMNR13GLCRDK9AMLIDO68FI9E89H8222222244DCQmNKI876YC4*MJIN-YIUfQURCFTPYUfz3F11-11---------------4312955BA6LKHA6IF996667897BA9A9A7DA8F--275E7------CA87BA8A99CABCCAA-9CBB9CBAAA9A8AAAAABGDI89876C9CBBCCCCCCCCCBCBAA4889A5-9BCCDDC9CDDC--1655555444579Z7F222112-11111--14666649352HDHJMHGVRRIMKNINHJO2----11--9AA9C99999EIEEEGKJHJHGBBB4444--h1LL6799--------2-1-------------------------38243434434S4 --1-68--------6323213333232111111111122211211123232-1-2221112111-----1-------------11-12-11-213---1-223226-8--------------------------------------------------1----1---------1--13-C----191123261-6111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 412 STR:RPRED 81.7 SQ:SECSTR ########################################THHHHHHHTcHHHHHHHHcccHHHHHHHHHHHHHHHHHccccEEEEEETTccEEEETTTTcTTccTTcccTTcHHHHHHHHHcEEEEEcTTTccEEEEEEEEEEETTEEEEEE##########################################HHcHHHHHHHTTTccccTHHHHHTTHHHHHTcccccTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcEEEccccccccHHHHHHHHHHHHHHHHHHHHHcccGccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccTccccccEEEEHHHHHHHHHHHHHHHHHHTTEEEEEEEEccccEEEEcHHHHHHHHHHHHHHHHHTcTTcEEEEEEEEEETTEEEEEEEEccccccHHHHHHTTcTTccccGGGccccHHHHHHHHHHHTTcEEEEEETTTEEEEEEEEEEccTTTccc########## DISOP:02AL 1-1,498-501,503-505| PSIPRED cccHHHHHHHHHHHHHHHHHHccccEEEEEEHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccccEEEEEEccccEEEEEEcccHHHHHccccccccccccccccccEEccccccccEEEEEEEccccccccEEEEEEEEcHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHHHHHcccEEEEEEcccccEEEEcHHHHHHHHHHHHHHHHHccccccEEEEEEEEEccEEEEEEEEccccccHHHHHHHcccccccccccccccHHHHHHHHHHHHcccEEEEEEccccEEEEEEEEcccccccccHHHHHcccc //