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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08082.1
DDBJ      :             2-oxo-acid dehydrogenase E1 component, homodimeric type
Swiss-Prot:ODP1_RALEH   RecName: Full=Pyruvate dehydrogenase E1 component;         EC=1.2.4.1;

Homologs  Archaea  1/68 : Bacteria  443/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
c.36.1c.48.1
:895 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   67->892 2g25A PDBj 0.0 63.8 %
:RPS:PDB   83->558 1d8yA PDBj 2e-71 13.8 %
:RPS:PDB   495->866 1dtwB PDBj 8e-36 14.8 %
:RPS:SCOP  65->472 1l8aA1  c.36.1.10 * 8e-73 66.6 %
:RPS:SCOP  476->705 1l8aA2  c.36.1.6 * e-108 67.3 %
:RPS:SCOP  707->892 1l8aA3  c.48.1.1 * 2e-31 53.8 %
:HMM:SCOP  64->472 1l8aA1 c.36.1.10 * 1.9e-135 40.8 %
:HMM:SCOP  476->706 1l8aA2 c.36.1.6 * 3.2e-109 61.6 %
:HMM:SCOP  707->895 1l8aA3 c.48.1.1 * 1e-62 48.1 %
:RPS:PFM   99->308 PF00456 * Transketolase_N 3e-25 39.4 %
:HMM:PFM   92->298 PF00456 * Transketolase_N 2.5e-15 27.7 195/333  
:HMM:PFM   367->430 PF00456 * Transketolase_N 6.8e-08 25.8 62/333  
:BLT:SWISS 1->895 ODP1_RALEH 0.0 94.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08082.1 GT:GENE ABF08082.1 GT:PRODUCT 2-oxo-acid dehydrogenase E1 component, homodimeric type GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1312479..1315166 GB:FROM 1312479 GB:TO 1315166 GB:DIRECTION + GB:PRODUCT 2-oxo-acid dehydrogenase E1 component, homodimeric type GB:PROTEIN_ID ABF08082.1 GB:DB_XREF GI:93353993 InterPro:IPR004660 LENGTH 895 SQ:AASEQ MSAVPEQILGASSANDADPQETHEWLDALQGVLNAEGTERAAFLIDKQIEYARVNGVTQPFHAETPYINTIPVEQQARIPGDQDIEHRIRSYTRWNAMAMVLRANKHTNVGGHISSFASAATLYDVGYNHFWRAPSEQSGGDLVFVQGHSAPGVYSRAFLLGRLTPEQLDSFRQEVDGKGISSYPHPWLMPDFWQFPTVSMGLGPIMAIYQARFMKYLASRGLVNAGDRKVWAFLGDGETDEPESLGAIGMAGREKLDNLVFVINCNLQRLDGPVRGNGKIIQELESEFRGSGWNVIKLIWGSRWDPLLQRDTKGLLMKRMMECVDGEYQTFKAKDGAYVREHFFNTPELKAMVADWSDDDIWRLNRGGHDPHKVYAAYKAASEHKGQPTLILAKTIKGYGMGDAGQAMNVAHQQKKMPVDAIRAFRDQFNIPVADDKLEEVPYLTFPEGSKELEYMRKARMDLGGYLPARRMKAEALKVPELSAFEALIKATGEGREVSTTMAFVRILNTLLKDKQVGKHVVPIVPDESRTFGMEGLFRQVGIWNQEGQKYVPEDHDQLMFYKESQTGQVLQEGINEAGAMCDWIAAATSYSTHGVQMIPFYIYYSMFGIQRIGDLCWAAADMRSRGFLLGGTAGRTTLNGEGLQHEDGHSHVFHAVIPNCISYDPTFQYELAVIMQDGLRRMYAEQEDVYYYLTVMNENYEHPEMPAGVERDIVQGMYQFRKGVENSNAPRVQLLGSGTIFREVIAAADLLKKDWGVESDLWSCPSFTELAREGQEVERHNLLNPTGTQRESFVAQKLKGVRGPVIASTDYIRAFAEQIRPFVPRRYVVLGTDGFGRSDTREKLRHFFEVDRYWVTVAALKALADEGAIGREKVAEAIKKYNLDPNKPNPMSV GT:EXON 1|1-895:0| SW:ID ODP1_RALEH SW:DE RecName: Full=Pyruvate dehydrogenase E1 component; EC=1.2.4.1; SW:GN Name=pdhA; OrderedLocusNames=H16_A1374; SW:KW Complete proteome; Glycolysis; Oxidoreductase; Pyruvate;Thiamine pyrophosphate. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->895|ODP1_RALEH|0.0|94.2|895/895| GO:SWS:NREP 3 GO:SWS GO:0006096|"GO:glycolysis"|Glycolysis| GO:SWS GO:0016491|"GO:oxidoreductase activity"|Oxidoreductase| GO:SWS GO:0055114|"GO:oxidation reduction"|Oxidoreductase| BL:PDB:NREP 1 BL:PDB:REP 67->892|2g25A|0.0|63.8|820/831| RP:PDB:NREP 2 RP:PDB:REP 83->558|1d8yA|2e-71|13.8|463/601| RP:PDB:REP 495->866|1dtwB|8e-36|14.8|324/326| RP:PFM:NREP 1 RP:PFM:REP 99->308|PF00456|3e-25|39.4|203/275|Transketolase_N| HM:PFM:NREP 2 HM:PFM:REP 92->298|PF00456|2.5e-15|27.7|195/333|Transketolase_N| HM:PFM:REP 367->430|PF00456|6.8e-08|25.8|62/333|Transketolase_N| RP:SCP:NREP 3 RP:SCP:REP 65->472|1l8aA1|8e-73|66.6|395/402|c.36.1.10| RP:SCP:REP 476->705|1l8aA2|e-108|67.3|211/213|c.36.1.6| RP:SCP:REP 707->892|1l8aA3|2e-31|53.8|182/186|c.48.1.1| HM:SCP:REP 64->472|1l8aA1|1.9e-135|40.8|409/415|c.36.1.10|1/1|Thiamin diphosphate-binding fold (THDP-binding)| HM:SCP:REP 476->706|1l8aA2|3.2e-109|61.6|229/230|c.36.1.6|1/1|Thiamin diphosphate-binding fold (THDP-binding)| HM:SCP:REP 707->895|1l8aA3|1e-62|48.1|185/186|c.48.1.1|1/1|TK C-terminal domain-like| OP:NHOMO 547 OP:NHOMOORG 450 OP:PATTERN -------------------------------------1------------------------------ 1211211111111111111-11112211111211111245-11211211111322111112231121242--------1-------1----------------1--------------------------------11111------------------------------------------11111---------------------------------------------------------------------------------------------------------------------------------------1---21111111-1---111111-------11-1--1------11-1--1--11111-----11311--1--11-----------1---3--2-1-1--------------11-1-11-1--1-11--------2-----1------------------------------1--1--2222222241232222112322221232312321211112122222231121-1111111111111111111--------------1-1------1121----1-------------------1-11---1111111121111111111111111111111-1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111123141111113131111111111111111111111112211111111111111--------------------------------------------------------- ------------------------------------------------------------------------------------------------------------1------------------------------------------------------1---------11-------------1-----2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 874 STR:RPRED 97.7 SQ:SECSTR ###############cccccTTccccGGGcccccTTcccc####cccccccccccTTcccEEccccTTcccccGGGcccccHHHHHHHHTTTcccccEEEEHHHHHHHcTTcccccHHHHHHHHHccccccHHHHHcccTTcccGGGccHHHHHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHTHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccTTTTcTTTTTTTcccccccccccccccHHHHHTTTcHHHHHHHHHHHHHHHHHHTTTTGGGGccTTTcccccEEEcccccccccEEcccGGGcccccHHHHHHHTTccccTTEEEEEEEETTHHHHHHHHHTccHHHHHHHTTccGGGccHHHHHHHHHHHHTTccHHHcGGGTHHHHTTccTTHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcEEEcTTccEEHHHHEcGGGGccccHHHHHHHHHHHHHHHHHHcTHHHcHHHHHHHHHHHHHHHHcccEEEEEEETTEEEEEEETTTHHHHHHHHHcccccccccEEcGGGccEETTccEEEccccHHHHHHHHHHHHHHHHHHcTTcEEEEEEEHHHHGGGHHHHHHHHHHTcccEEEEEEEcccGGGcTTcTTcccccHHHHHTcccccEEEccccHHHHHHHHHHHHHcccHccccccEEEEccccEEcccTTccHHHHTTccEEEEccccEcccccccEEEEEcTTHHHHHHHHHHHHHHTHTccEEEEEcccHHHHHTHHccHHHHHHHccTTccEEEEccHHccTTcHcEEcccGGGGGTccEGGGTccEEEEEEccccccccccHHHHHHHHTccHHHHHHHHHHHHHHHTTHHHcccccTTccTTccTHTHHHH## DISOP:02AL 1-8,179-179,492-498| PSIPRED ccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccccccEEEEEcccccHHHHHHHHHcccccHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEccccccHHHHHHHHHHHHcccccEEEEEEccccEEccccccccccHHHHHHHHHHcccEEEEEcccccHHHHHHcccccHHHHHHHHcccccccHHHHcccccHHHHcccccHHHHHHccccHHHHHHHHcccccHHHHHHHHHHHHccccccEEEEEEEccccccccHHHccccccccccccHHHHHHHHHHHcccccHHHHHHccccccccccHHHHHHHHHHHHHcccccccHHHHHHcccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHcHHccccccEEccccccccccccHHcccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHHHHHHHHHHccccEEEEEEEHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccHHHHHHHHHccccEEEccccHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccHHHHHHHHccEEEEEEccccccccEEEEEEccHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHccccccccHHHHHHHHHccccccEEEEEcHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccccccccc //