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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF08090.1
DDBJ      :             murein-DD-endopeptidase. Serine peptidase. MEROPS family S11
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  507/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
e.3.1
:393 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   126->354 1es4A PDBj 5e-14 29.2 %
:RPS:PDB   109->355 3bffA PDBj 9e-23 15.8 %
:RPS:SCOP  123->354 1hd8A2  e.3.1.1 * 1e-53 25.8 %
:HMM:SCOP  7->359 1tvfA2 e.3.1.1 * 8.4e-62 32.8 %
:RPS:PFM   123->336 PF00768 * Peptidase_S11 8e-29 40.8 %
:HMM:PFM   115->338 PF00768 * Peptidase_S11 8.6e-63 38.1 223/241  
:BLT:SWISS 118->362 PBP5_PSEAE 3e-60 49.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF08090.1 GT:GENE ABF08090.1 GT:PRODUCT murein-DD-endopeptidase. Serine peptidase. MEROPS family S11 GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 1323302..1324483 GB:FROM 1323302 GB:TO 1324483 GB:DIRECTION + GB:PRODUCT murein-DD-endopeptidase. Serine peptidase. MEROPS family S11 GB:PROTEIN_ID ABF08090.1 GB:DB_XREF GI:93354001 InterPro:IPR001967 LENGTH 393 SQ:AASEQ MFRIESLMPRFFGLPQLTALATSAVVSIALLAAPASYAATSSTATKSSSKKQAKSTKTTKKVASAKAEASPRKVIVVRNGKRTVVASRAAPVRAAFVPSKPSLGEAMGLRDTEDALALRSSVALVMDQNTNEVLFQKNPTAVLPIASITKLMTALVVMDARLPMDEMLTVTEEDRDTEKHSSSRLRFGTQLTRQEMLLLALMSSENRAASALGRNYPGGLPAFVGAMNRKARELGMSDSHFVDSNGLSSSNVSSAMDLARLVNAAYRNPTIREYSTQPEHEVTVFGRPMHYVSTNRLVRGGNWDIGLQKTGYISEAGQCLVMQTRVNDRNVVMVFLDSVGKLSRFADATRVRSWLEHQPATSAQPRPFPSNPNLTQGPKSPTAILVSQQSHGT GT:EXON 1|1-393:0| BL:SWS:NREP 1 BL:SWS:REP 118->362|PBP5_PSEAE|3e-60|49.2|244/310| TM:NTM 1 TM:REGION 15->36| SEG 32->70|aapasyaatsstatkssskkqakstkttkkvasakaeas| SEG 84->99|vvasraapvraafvps| SEG 244->254|snglsssnvss| BL:PDB:NREP 1 BL:PDB:REP 126->354|1es4A|5e-14|29.2|226/257| RP:PDB:NREP 1 RP:PDB:REP 109->355|3bffA|9e-23|15.8|241/262| RP:PFM:NREP 1 RP:PFM:REP 123->336|PF00768|8e-29|40.8|211/235|Peptidase_S11| HM:PFM:NREP 1 HM:PFM:REP 115->338|PF00768|8.6e-63|38.1|223/241|Peptidase_S11| GO:PFM:NREP 2 GO:PFM GO:0006508|"GO:proteolysis"|PF00768|IPR001967| GO:PFM GO:0009002|"GO:serine-type D-Ala-D-Ala carboxypeptidase activity"|PF00768|IPR001967| RP:SCP:NREP 1 RP:SCP:REP 123->354|1hd8A2|1e-53|25.8|217/243|e.3.1.1| HM:SCP:REP 7->359|1tvfA2|8.4e-62|32.8|268/0|e.3.1.1|1/1|beta-lactamase/transpeptidase-like| OP:NHOMO 1094 OP:NHOMOORG 510 OP:PATTERN -------------------------------------------------------------------- ---221---------------------------111------1---------------------1--223--------112-1-1----------------------------------------111-11111-1---------2---------------------------------------------333665666577857775343322778333331221122244--------------------111------1-----11----------------2--11111111111--111----11-----------134344333434442434444444335214112366554232223333--2-1-----122221-11-1111111-11111111111-3323323221-11113--1---11221-11-1----22222222222-1111-11----------------1---1----1-111-121121112222222244442232555534222212211222222112113122322121111111111-112221-------22-111-1-1---1---------21--------------------1-----332121-11112222222122221211211--11111------24221323333333332-3343333333333333333222221114443444444424234422232222-222221222222--1111111111111211212212122211--133333322222122222222222222222---------1---4333333322211111111111111--1-------111-1-----------------------------------------212 --------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------1--------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 277 STR:RPRED 70.5 SQ:SECSTR ####################################################################################################EEcTTcTTHHHHHHHHTcEEEEEEEEETTTTEEEEEEcTTccEEcGGGHHHHHHHHHHHHTTGGGcEEEccTTTcccTccTTGGGcTTcEEEHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHTTcccccccccTTGGGcccTTccTTEEcHHHHHHHHHHHHTcccccHHHHHHHHHHHHHHTccccTTTGGGGccTTcEEEEEEEEEETTTEEEEEEEEEcTTcccEEEEEEEEcccTTccccHHHHHHHcHHcccHHHTccEEEETTEEEc################ DISOP:02AL 1-1,39-68,365-378,389-394| PSIPRED cccHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEcccEEEEEcccccEEEEEcccccccccccccccccccccccccEEEEEEcccccEEEEEccccccccHHHHHHHHHHHHHccccccccEEEccHHHHccccccEEEEccccEEEHHHHHHHHHHHccHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccEEEcccccccccccHHHHHHHHHHHHHccccHHHHEEEEEEEEEccccEEEEEEEccccccccccccEEEEEcccccccEEEEEEEEccEEEEEEEEcccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEcccccccc //